RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ALG11Q2TAA5 492 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 HSP90AA5PQ58FG0 334 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 LDLRAP1Q5SW96 308 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 C3orf62Q6ZUJ4 267 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 KCNMB4Q86W47 210 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 MDM1Q8TC05 714 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 CERS2Q96G23 380 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 SCARF2Q96GP6 870 aaPredicted RBP18.39■□□□□ 0.53
PNKP-224ENST00000631020 APOLD1Q96LR9 279 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 BOCQ9BWV1 1114 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 TXLNGYQ9BZA5 131 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 OR2AG1Q9H205 316 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 ZDHHC3Q9NYG2 299 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 NINJ2Q9NZG7 142 aa18.39■□□□□ 0.53
PNKP-224ENST00000631020 IGLV3-16A0A075B6K0 115 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 TNFRSF10CO14798 259 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 DNAJC6O75061 913 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 ZNF8P17098 575 aaPredicted RBP18.38■□□□□ 0.53
PNKP-224ENST00000631020 KELP23276 732 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 BLKP51451 505 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 SRP54P61011 504 aaKnown RBP18.38■□□□□ 0.53
PNKP-224ENST00000631020 CEP128Q6ZU80 1094 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 MARK2Q7KZI7 788 aaKnown RBP18.38■□□□□ 0.53
PNKP-224ENST00000631020 MARCH9Q86YJ5 346 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 DENND6AQ8IWF6 608 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 DCBLD1Q8N8Z6 715 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 RASGEF1AQ8N9B8 481 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 NXPE2Q96DL1 559 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 PDXPQ96GD0 296 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 COPS8Q99627 209 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 NRSN2Q9GZP1 204 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 TCEAL2Q9H3H9 227 aaPredicted RBP18.38■□□□□ 0.53
PNKP-224ENST00000631020 CDC42EP4Q9H3Q1 356 aaKnown RBP18.38■□□□□ 0.53
PNKP-224ENST00000631020 VPS18Q9P253 973 aa18.38■□□□□ 0.53
PNKP-224ENST00000631020 APOBEC3BQ9UH17 382 aaKnown RBP18.38■□□□□ 0.53
PNKP-224ENST00000631020 LY6G6EA0A0G2JKS1 128 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 PRSS38A1L453 326 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 OR1I1O60431 355 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 C1QAP02745 245 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 INSM1Q01101 510 aaPredicted RBP18.37■□□□□ 0.53
PNKP-224ENST00000631020 TARDBPQ13148 414 aaKnown RBP eCLIP18.37■□□□□ 0.53
PNKP-224ENST00000631020 CTBP1Q13363 440 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 THOC5Q13769 683 aaKnown RBP18.37■□□□□ 0.53
PNKP-224ENST00000631020 TEDDM1Q5T9Z0 273 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 MRNIPQ6NTE8 343 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 CERS6Q6ZMG9 384 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 RD3Q7Z3Z2 195 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 CILP2Q8IUL8 1156 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 PHACTR4Q8IZ21 702 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 SDR16C5Q8N3Y7 309 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 CYP4F12Q9HCS2 524 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 IARS2Q9NSE4 1012 aaKnown RBP18.37■□□□□ 0.53
PNKP-224ENST00000631020 SLC17A6Q9P2U8 582 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 KLQ9UEF7 1012 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 MOSPD1Q9UJG1 213 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 SUFUQ9UMX1 484 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 CLCA2Q9UQC9 943 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 PRKAB1Q9Y478 270 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 U3KQA8 63 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 LRP4O75096 1905 aa18.37■□□□□ 0.53
PNKP-224ENST00000631020 TCRBV9S1A1TA0A576 114 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 LMO7DNF2Z398 122 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 CHUKO15111 745 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 SGTAO43765 313 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 VEGFDO43915 354 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 NUAK1O60285 661 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 PIAS1O75925 651 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 CDK14O94921 469 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 S1PR4O95977 384 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 GSTA2P09210 222 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 CTSCP53634 463 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 PPARDQ03181 441 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 RTP5Q14D33 572 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 TYSND1Q2T9J0 566 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 ZNF789Q5FWF6 425 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 ZNF470Q6ECI4 717 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 CYS1Q717R9 158 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 HID1Q8IV36 788 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 ZNF547Q8IVP9 402 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 RBFAQ8N0V3 343 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 CLDN19Q8N6F1 224 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 OTUD6BQ8N6M0 293 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.36■□□□□ 0.53
PNKP-224ENST00000631020 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.36■□□□□ 0.53
PNKP-224ENST00000631020 SGF29Q96ES7 293 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 SLC13A1Q9BZW2 595 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 SMYD2Q9NRG4 433 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 RAB21Q9UL25 225 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 PRSS21Q9Y6M0 314 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 DGKBQ9Y6T7 804 aa18.36■□□□□ 0.53
PNKP-224ENST00000631020 CELSR3Q9NYQ7 3312 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 IVLP07476 585 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 MSH3P20585 1137 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 AKT1P31749 480 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 SLC1A2P43004 574 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 TTPAP49638 278 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 HK3P52790 923 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 CYP4F3Q08477 520 aa18.35■□□□□ 0.53
PNKP-224ENST00000631020 ITIH4Q14624 930 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms