RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 AGKQ53H12 422 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 ARSIQ5FYB1 569 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 OGFOD2Q6N063 350 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 DDIASQ8IXT1 998 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 RSPRY1Q96DX4 576 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 SLC25A23Q9BV35 468 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 SFXN1Q9H9B4 322 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 RDH14Q9HBH5 336 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 PTBP2Q9UKA9 531 aaKnown RBP21.75■■□□□ 1.07
PNKP-220ENST00000627232 POMPQ9Y244 141 aa21.75■■□□□ 1.07
PNKP-220ENST00000627232 C2orf16Q68DN1 1984 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 ATP6AP2A0A1C7CYW4 349 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 TBX10O75333 385 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 ATP6AP2O75787 350 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 SNRPB2P08579 225 aaKnown RBP21.74■■□□□ 1.07
PNKP-220ENST00000627232 ALDOCP09972 364 aaKnown RBP21.74■■□□□ 1.07
PNKP-220ENST00000627232 OR56A5P0C7T3 313 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 ENO3P13929 434 aaPredicted RBP21.74■■□□□ 1.07
PNKP-220ENST00000627232 TIMP2P16035 220 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 MRPL19P49406 292 aaKnown RBP21.74■■□□□ 1.07
PNKP-220ENST00000627232 ZNF805Q5CZA5 627 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 METTL2BQ6P1Q9 378 aaKnown RBP21.74■■□□□ 1.07
PNKP-220ENST00000627232 SORCS1Q8WY21 1168 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 LMAN2LQ9H0V9 348 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 WDR41Q9HAD4 459 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 ZNF225Q9UK10 706 aa21.74■■□□□ 1.07
PNKP-220ENST00000627232 ANKRD12Q6UB98 2062 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 A0A1B0GTL3 188 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 NFATC1O95644 943 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 PRR35P0CG20 571 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 ARSAP15289 507 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 ST8SIA6P61647 398 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 B4GALNT1Q00973 533 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 FBXO48Q5FWF7 155 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 CDKL4Q5MAI5 379 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 FAM109BQ6ICB4 259 aaPredicted RBP21.73■■□□□ 1.07
PNKP-220ENST00000627232 SULT1C3Q6IMI6 304 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 RFLNAQ6ZTI6 216 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 SPATA19Q7Z5L4 167 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 HPS6Q86YV9 775 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 HOMEZQ8IX15 550 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 C12orf76Q8N812 135 aaPredicted RBP21.73■■□□□ 1.07
PNKP-220ENST00000627232 BPIFB1Q8TDL5 484 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 KCNV2Q8TDN2 545 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 UBTD2Q8WUN7 234 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 MYLIPQ8WY64 445 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 POLG2Q9UHN1 485 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 MYO7AQ13402 2215 aa21.73■■□□□ 1.07
PNKP-220ENST00000627232 KIF26AQ9ULI4 1882 aaPredicted RBP21.72■■□□□ 1.07
PNKP-220ENST00000627232 VCLP18206 1134 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 GPX3P22352 226 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 VHLP40337 213 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 GSTA3Q16772 222 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 XKR7Q5GH72 579 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 PIGGQ5H8A4 983 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 TMC5Q6UXY8 1006 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 HACD2Q6Y1H2 254 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 DPPA4Q7L190 304 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 ADGRG6Q86SQ4 1221 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 ETFBKMTQ8IXQ9 262 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 TUBGCP3Q96CW5 907 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 ASB16Q96NS5 453 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 CDRT15Q96T59 188 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 TACO1Q9BSH4 297 aaKnown RBP21.72■■□□□ 1.07
PNKP-220ENST00000627232 SPATA16Q9BXB7 569 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 FAM83DQ9H4H8 585 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 FBRSL1Q9HCM7 1045 aaKnown RBP21.72■■□□□ 1.07
PNKP-220ENST00000627232 PCDH12Q9NPG4 1184 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 OBP2AQ9NY56 170 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 SARDHQ9UL12 918 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 TMPRSS11EQ9UL52 423 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 LRRC42Q9Y546 428 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 ASB1Q9Y576 335 aa21.72■■□□□ 1.07
PNKP-220ENST00000627232 BBIP1A8MTZ0 92 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 TULP3O75386 442 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 MATN4O95460 622 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 CTSLP07711 333 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 LINC00032P0C843 101 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 PRDX3P30048 256 aaKnown RBP21.71■■□□□ 1.07
PNKP-220ENST00000627232 VIPR2P41587 438 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 GRIK2Q13002 908 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 GTF2H2Q13888 395 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 CCNIQ14094 377 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 GBX1Q14549 363 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 TCEAL5Q5H9L2 206 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 LRRC73Q5JTD7 316 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 FAM78AQ5JUQ0 283 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 C9orf50Q5SZB4 431 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 TRIM68Q6AZZ1 485 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 GTF2H2CQ6P1K8 395 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 TTC23LQ6PF05 361 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 LRRC74BQ6ZQY2 392 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 GOLGA7Q7Z5G4 137 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 HSD11B1LQ7Z5J1 315 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 C12orf40Q86WS4 652 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 NPAS3Q8IXF0 933 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 SMARCD2Q92925 531 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 ESAMQ96AP7 390 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 TIFAQ96CG3 184 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 NPAS2Q99743 824 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms