RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 WDR36Q8NI36 951 aaKnown RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 ACTL9Q8TC94 416 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 BLOC1S5Q8TDH9 187 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 TADA1Q96BN2 335 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ZNF578Q96N58 590 aaPredicted RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 TTC25Q96NG3 672 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 ALS2CR12Q96Q35 445 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 TRIB3Q96RU7 358 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 AGAP2Q99490 1192 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 LRRN3Q9H3W5 708 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 RMI1Q9H9A7 625 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 POLR1BQ9H9Y6 1135 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 EPB41L5Q9HCM4 733 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 BPIFA1Q9NP55 256 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 SPATS2LQ9NUQ6 558 aaKnown RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.33□□□□□ -1.4
TCF4-249ENST00000625716 AKAP7Q9P0M2 348 aaPredicted RBP6.33□□□□□ -1.4
TCF4-249ENST00000625716 TAAR2Q9P1P5 351 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 EGFL7Q9UHF1 273 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 GUCA1BQ9UMX6 200 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PKP3Q9Y446 797 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 PCDHB1Q9Y5F3 818 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 SHROOM3Q8TF72 1996 aa6.33□□□□□ -1.4
TCF4-249ENST00000625716 TRBV23OR9-2A0A075B6M9 112 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 CCDC187A0A096LP49 1063 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 LOC285095A0A1B0GVY8 99 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 C2orf81A6NN90 581 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 FADS2P1A8MWK0 482 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 GPR89AB7ZAQ6 455 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 TAF4O00268 1085 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 STX7O15400 261 aaKnown RBP6.32□□□□□ -1.4
TCF4-249ENST00000625716 GRID2O43424 1007 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 NOBOXO60393 691 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 BRINP1O60477 761 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 SNX2O60749 519 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 PPFIA2O75334 1257 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 CRTAMO95727 393 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 SOD1P00441 154 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 FUCA1P04066 466 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 MPOP05164 745 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 FGF1P05230 155 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 CCDC175P0C221 793 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 GPR89BP0CG08 455 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 ACP5P13686 325 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 VCLP18206 1134 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 HMGCLP35914 325 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 SPAM1P38567 509 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 LSSP48449 732 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 INHBCP55103 352 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 DCDC1P59894 354 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 CCL7P80098 99 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 PDE1BQ01064 536 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 HLTFQ14527 1009 aaKnown RBP eCLIP6.32□□□□□ -1.4
TCF4-249ENST00000625716 POU4F3Q15319 338 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 SLC1A5Q15758 541 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 AMZ1Q400G9 498 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 C3orf38Q5JPI3 329 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 CERCAMQ5T4B2 595 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 AADACL2Q6P093 401 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 C19orf48Q6RUI8 117 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 KDELC1Q6UW63 502 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 SEZ6L2Q6UXD5 910 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 PIM3Q86V86 326 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 NRROSQ86YC3 692 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 ARL14Q8N4G2 192 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 GPR26Q8NDV2 337 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 BRSK1Q8TDC3 778 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 HNRNPLLQ8WVV9 542 aaKnown RBP6.32□□□□□ -1.4
TCF4-249ENST00000625716 ALG3Q92685 438 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 FGF11Q92914 225 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 GLYATL1Q969I3 302 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 ATXN7L3BQ96GX2 97 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 AHCYL2Q96HN2 611 aaKnown RBP6.32□□□□□ -1.4
TCF4-249ENST00000625716 OXNAD1Q96HP4 312 aaPredicted RBP6.32□□□□□ -1.4
TCF4-249ENST00000625716 COX14Q96I36 57 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 TMEM74Q96NL1 305 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 PLEKHG4BQ96PX9 1271 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 WDR24Q96S15 920 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 FAM118BQ9BPY3 351 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 FICDQ9BVA6 458 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 OR2AG1Q9H205 316 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 GBA3Q9H227 469 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 CARD9Q9H257 536 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 GSX1Q9H4S2 264 aaPredicted RBP6.32□□□□□ -1.4
TCF4-249ENST00000625716 C10orf88Q9H8K7 445 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 TRIM39Q9HCM9 518 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 THSD1Q9NS62 852 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 TRIM10Q9UDY6 481 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 APPL1Q9UKG1 709 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 PACSIN2Q9UNF0 486 aaPredicted RBP6.32□□□□□ -1.4
TCF4-249ENST00000625716 SATB2Q9UPW6 733 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 PRKAB1Q9Y478 270 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 PLEKHM1Q9Y4G2 1056 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 SPO11Q9Y5K1 396 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 RNF215Q9Y6U7 377 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 ANKRD36A6QL64 1941 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 KNL1Q8NG31 2342 aa6.32□□□□□ -1.4
TCF4-249ENST00000625716 CABIN1Q9Y6J0 2220 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 LAMA1P25391 3075 aa6.31□□□□□ -1.4
TCF4-249ENST00000625716 GLYATL1P3A0A0U1RQE8 302 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms