RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 SLC19A1P41440 591 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 TSPAN7P41732 249 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 HALP42357 657 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 PRLHRP49683 370 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 CDK16Q00536 496 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 OLIG2Q13516 323 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 SPARCL1Q14515 664 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 PHF19Q5T6S3 580 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 TMEM164Q5U3C3 297 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 TMEM220Q6QAJ8 160 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 ARHGAP22Q7Z5H3 698 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 PLXDC1Q8IUK5 500 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 SPACA3Q8IXA5 215 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 OR13C4Q8NGS5 318 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 OR2L2Q8NH16 312 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 C1orf54Q8WWF1 131 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 DCUN1D1Q96GG9 259 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 NAP1L3Q99457 506 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-217ENST00000624009 COPS8Q99627 209 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 SEMA6CQ9H3T2 930 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 VPS37BQ9H9H4 285 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 RDH14Q9HBH5 336 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 ETNK1Q9HBU6 452 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 SLC40A1Q9NP59 571 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 ZNF624Q9P2J8 865 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-217ENST00000624009 CRLS1Q9UJA2 301 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 SLC30A1Q9Y6M5 507 aa12.22□□□□□ -0.45
LINC00963-217ENST00000624009 PDZK1P1A8MUH7 402 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 ZSCAN12O43309 604 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 AP2A2O94973 939 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 IFNB1P01574 187 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 C9P02748 559 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 ATP1B2P14415 290 aaPredicted RBP12.21□□□□□ -0.45
LINC00963-217ENST00000624009 ACRV1P26436 265 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 AKT1P31749 480 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CSTF2P33240 577 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CTSCP53634 463 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 RAB15P59190 212 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CFHR1Q03591 330 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 ACVR1Q04771 509 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CACNG1Q06432 222 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 C16orf72Q14CZ0 275 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 COL28A1Q2UY09 1125 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 BROXQ5VW32 411 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 USP53Q70EK8 1073 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 TRIM48Q8IWZ4 208 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 RASGEF1CQ8N431 466 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 HNRNPLLQ8WVV9 542 aaKnown RBP12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CDKN2AIPNLQ96HQ2 116 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 PBKQ96KB5 322 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CCDC74BQ96LY2 380 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 TEFMQ96QE5 360 aaKnown RBP12.21□□□□□ -0.45
LINC00963-217ENST00000624009 TAAR9Q96RI9 348 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CCM2Q9BSQ5 444 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 DDA1Q9BW61 102 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 ASPSCR1Q9BZE9 553 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 PRORYQ9H606 182 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 CASS4Q9NQ75 786 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 SCHIP1Q9P0W5 487 aaPredicted RBP12.21□□□□□ -0.45
LINC00963-217ENST00000624009 EPHA6Q9UF33 1036 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 DNAJC16Q9Y2G8 782 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 KCTD3Q9Y597 815 aa12.21□□□□□ -0.45
LINC00963-217ENST00000624009 OR2AG2A6NM03 316 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 E7EVH7 732 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 GPR39O43194 453 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 HOXB3P14651 431 aaPredicted RBP12.2□□□□□ -0.46
LINC00963-217ENST00000624009 ADRA1DP25100 572 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 NDUFS1P28331 727 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 SLC5A2P31639 672 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 MC4RP32245 332 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 CAPZBP47756 277 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 RPA4Q13156 261 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 ITIH4Q14624 930 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 PTPRCAPQ14761 206 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 PLA2G4EQ3MJ16 856 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 LYPLAL1Q5VWZ2 237 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 NKAIN2Q5VXU1 208 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 KLHL35Q6PF15 583 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 PACS1Q6VY07 963 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 CERS6Q6ZMG9 384 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 PDZD3Q86UT5 571 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 DNAAF3Q8N9W5 541 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 LSM14AQ8ND56 463 aaKnown RBP12.2□□□□□ -0.46
LINC00963-217ENST00000624009 HM13Q8TCT9 377 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 ANP32BQ92688 251 aaKnown RBP12.2□□□□□ -0.46
LINC00963-217ENST00000624009 CXorf40BQ96DE9 158 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 SGF29Q96ES7 293 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 DNAJC1Q96KC8 554 aaKnown RBP12.2□□□□□ -0.46
LINC00963-217ENST00000624009 ZPBPQ9BS86 351 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 RAB6BQ9NRW1 208 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 ZDHHC3Q9NYG2 299 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 PISDQ9UG56 409 aa12.2□□□□□ -0.46
LINC00963-217ENST00000624009 SNRNP200O75643 2136 aaKnown RBP12.19□□□□□ -0.46
LINC00963-217ENST00000624009 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.19□□□□□ -0.46
LINC00963-217ENST00000624009 TRBV23OR9-2A0A075B6M9 112 aa12.19□□□□□ -0.46
LINC00963-217ENST00000624009 TEX51A0A1B0GUA7 166 aa12.19□□□□□ -0.46
LINC00963-217ENST00000624009 F8W8V4 182 aa12.19□□□□□ -0.46
LINC00963-217ENST00000624009 CES2O00748 559 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms