RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ZDHHC12Q96GR4 267 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CCM2Q9BSQ5 444 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 DNAJC11Q9NVH1 559 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 PCYOX1Q9UHG3 505 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 MMP17Q9ULZ9 603 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 A0A0J9YYE9 177 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CCDC160A6NGH7 325 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 DCLK1O15075 740 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CACNG3O60359 315 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TRBC1P01850 177 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 GTF2E2P29084 291 aaKnown RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 SESN3P58005 492 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 SIGLEC14Q08ET2 396 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TRAF2Q12933 501 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 ARHGAP40Q5TG30 622 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 OXR1Q8N573 874 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CPT1BQ92523 772 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 GFM2Q969S9 779 aaKnown RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 AZIN2Q96A70 460 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 PYCR2Q96C36 320 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 GAL3ST4Q96RP7 486 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 PRMT1Q99873 361 aaKnown RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 XKR8Q9H6D3 395 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 XPR1Q9UBH6 696 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 ZFP69BQ9UJL9 534 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CDC14AQ9UNH5 594 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 OR5K4A6NMS3 321 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 CHN1P15882 459 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 MPSTP25325 297 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 PPP2R1BP30154 601 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 GRIA1P42261 906 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 SEL1L3Q68CR1 1132 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 BEND5Q7L4P6 421 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 PCYOX1LQ8NBM8 494 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 SRFBP1Q8NEF9 429 aaKnown RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 RBM18Q96H35 190 aaKnown RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 ECSITQ9BQ95 431 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 RAB11FIP5Q9BXF6 653 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 POLG2Q9UHN1 485 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TCHHQ07283 1943 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TCRBV9S1A1TA0A576 114 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 STATHP02808 62 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 NTRK1P04629 796 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 OCM2P0CE71 109 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 OCMP0CE72 109 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 VARSP26640 1264 aaKnown RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 AVPR1BP47901 424 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 HSPA7P48741 367 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 HHEXQ03014 270 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 NAB1Q13506 487 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TSPAN33Q86UF1 283 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 TP53INP2Q8IXH6 220 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 FBXO15Q8NCQ5 510 aaPredicted RBP8.97□□□□□ -0.97
HDAC9-229ENST00000622668 ESAMQ96AP7 390 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 KLHL29Q96CT2 875 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 HAUS8Q9BT25 410 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 HSD3B7Q9H2F3 369 aa8.97□□□□□ -0.97
HDAC9-229ENST00000622668 FAM237BA0A1B0GVD1 139 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 AIM2O14862 343 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 CCDC22O60826 627 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 DCTN3O75935 186 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 CHRM1P11229 460 aaPredicted RBP8.96□□□□□ -0.97
HDAC9-229ENST00000622668 CENPAP49450 140 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 GYS2P54840 703 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 SPEM2Q0P670 501 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 SLC13A2Q13183 592 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 MRPL58Q14197 206 aaKnown RBP8.96□□□□□ -0.97
HDAC9-229ENST00000622668 NAA25Q14CX7 972 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 RNASEH2BQ5TBB1 312 aaKnown RBP8.96□□□□□ -0.97
HDAC9-229ENST00000622668 ANKRD22Q5VYY1 191 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 ZCCHC23Q6ZST2 131 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 APTXQ7Z2E3 356 aaKnown RBP8.96□□□□□ -0.97
HDAC9-229ENST00000622668 SDR16C5Q8N3Y7 309 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 JSRP1Q96MG2 331 aaPredicted RBP8.96□□□□□ -0.97
HDAC9-229ENST00000622668 LRRC37BQ96QE4 947 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 CNPPD1Q9BV87 410 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 RPS6KB2Q9UBS0 482 aa8.96□□□□□ -0.97
HDAC9-229ENST00000622668 TMEM150CB9EJG8 249 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 RIPK2O43353 540 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 RGS14O43566 566 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 LDOC1O95751 146 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-229ENST00000622668 GRIA3P42263 894 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 GUCA1AP43080 201 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-229ENST00000622668 CAPZA2P47755 286 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 ADGRE1Q14246 886 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 HSF5Q4G112 596 aaPredicted RBP8.96□□□□□ -0.98
HDAC9-229ENST00000622668 HOMEZQ8IX15 550 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 PQLC3Q8N755 202 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 USP7Q93009 1102 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 EDEM2Q9BV94 578 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 TEX12Q9BXU0 123 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 MRPL1Q9BYD6 325 aaKnown RBP8.96□□□□□ -0.98
HDAC9-229ENST00000622668 BRINP2Q9C0B6 783 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 RMND5AQ9H871 391 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 ANKHQ9HCJ1 492 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 PRSS16Q9NQE7 514 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 ANKRD6Q9Y2G4 727 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 GRXCR2A6NFK2 248 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 GFRA2O00451 464 aa8.96□□□□□ -0.98
HDAC9-229ENST00000622668 C2P06681 752 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms