RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 FXYD1O00168 92 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 NR5A2O00482 541 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 VILLO15195 856 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 LATS1O95835 1130 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 RPS17P08708 135 aaKnown RBP17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PRSS56P0CW18 603 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 HSD17B1P14061 328 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 TCF3P15923 654 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 LBPP18428 481 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 ATP6V1B2P21281 511 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 ATP6V0D1P61421 351 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 CLCQ05315 142 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 LCP2Q13094 533 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 SMAD2Q15796 467 aaKnown RBP17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PUS10Q3MIT2 529 aaKnown RBP17.25■□□□□ 0.35
FAM3A-222ENST00000621967 NADK2Q4G0N4 442 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 OGFOD2Q6N063 350 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 AFTPHQ6ULP2 937 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 CARM1Q86X55 608 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 LGI2Q8N0V4 545 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 BBS5Q8N3I7 341 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 ANKFN1Q8N957 763 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 ST13P5Q8NFI4 369 aaPredicted RBP17.25■□□□□ 0.35
FAM3A-222ENST00000621967 NSMCE3Q96MG7 304 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PSKH2Q96QS6 385 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 TCF12Q99081 682 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PRPF18Q99633 342 aaKnown RBP17.25■□□□□ 0.35
FAM3A-222ENST00000621967 SLC52A3Q9NQ40 469 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 TAS2R13Q9NYV9 303 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 GIMAP2Q9UG22 337 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 SEPT3Q9UH03 358 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 POLG2Q9UHN1 485 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 RNF11Q9Y3C5 154 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 SPO11Q9Y5K1 396 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 SNX13Q9Y5W8 968 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 UNC80Q8N2C7 3258 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 VPS4BO75351 444 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PRR35P0CG20 571 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 GFAPP14136 432 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 NAA20P61599 178 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 GNA12Q03113 381 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 TFF2Q03403 129 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 NRF1Q16656 503 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 ADGRF1Q5T601 910 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 IYDQ6PHW0 289 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PAQR3Q6TCH7 311 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 Q6ZNB5 142 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 MTSS1LQ765P7 747 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 BBS7Q8IWZ6 715 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 GOLM1Q8NBJ4 401 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 BPIFB1Q8TDL5 484 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 TRPC4APQ8TEL6 797 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 DDI1Q8WTU0 396 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.25■□□□□ 0.35
FAM3A-222ENST00000621967 KCNA7Q96RP8 456 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PHF7Q9BWX1 381 aaPredicted RBP17.25■□□□□ 0.35
FAM3A-222ENST00000621967 OBP2AQ9NY56 170 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 PTTG2Q9NZH5 202 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 IKZF3Q9UKT9 509 aa17.25■□□□□ 0.35
FAM3A-222ENST00000621967 AQP12BA6NM10 295 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 HEPACAM2A8MVW5 462 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 KLK8O60259 260 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 GREM1O60565 184 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 RHOBTB1O94844 696 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 STAMBPO95630 424 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 BMP2P12643 396 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 CR2P20023 1033 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 FCARP24071 287 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 EEF1DP29692 281 aaKnown RBP17.24■□□□□ 0.35
FAM3A-222ENST00000621967 SLC6A4P31645 630 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 FOXM1Q08050 763 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 TAF1AQ15573 450 aaPredicted RBP17.24■□□□□ 0.35
FAM3A-222ENST00000621967 GEN1Q17RS7 908 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 MAP7D1Q3KQU3 841 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 SPATS1Q496A3 300 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 TANGO2Q6ICL3 276 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 BORAQ6PGQ7 559 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 RBM44Q6ZP01 1051 aaKnown RBP17.24■□□□□ 0.35
FAM3A-222ENST00000621967 ERMP1Q7Z2K6 904 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 AQP12AQ8IXF9 295 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 SLC15A3Q8IY34 581 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 CFAP52Q8N1V2 620 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 FBXO39Q8N4B4 442 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 TSPEARQ8WU66 669 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 RSPRY1Q96DX4 576 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 SLC29A1Q99808 456 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 PRDM6Q9NQX0 595 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 TBC1D14Q9P2M4 693 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 GMPR2Q9P2T1 348 aaKnown RBP17.24■□□□□ 0.35
FAM3A-222ENST00000621967 RNF112Q9ULX5 631 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 ACTL7AQ9Y615 435 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 OAS3Q9Y6K5 1087 aaKnown RBP17.24■□□□□ 0.35
FAM3A-222ENST00000621967 AK5Q9Y6K8 562 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 CROCCQ5TZA2 2017 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 COL6A3P12111 3177 aa17.24■□□□□ 0.35
FAM3A-222ENST00000621967 A0A1B0GTL3 188 aa17.23■□□□□ 0.35
FAM3A-222ENST00000621967 UBA6A0AVT1 1052 aaPredicted RBP17.23■□□□□ 0.35
FAM3A-222ENST00000621967 ZNF839A8K0R7 811 aa17.23■□□□□ 0.35
FAM3A-222ENST00000621967 SUPT3HB4E1H0 165 aa17.23■□□□□ 0.35
FAM3A-222ENST00000621967 STX16O14662 325 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms