RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 FLT1P17948 1338 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 IGKV3D-15A0A087WSY6 115 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 TCERG1O14776 1098 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 SMAD9O15198 467 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 SLC22A2O15244 555 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 DAB1O75553 588 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 BMP10O95393 424 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 GCNT3O95395 438 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 EIF2S1P05198 315 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 TAF6P49848 677 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 DRG2P55039 364 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 ALFQ53S48 1182 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 NDUFAF5Q5TEU4 345 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 ZC2HC1BQ5TFG8 222 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 CLEC17AQ6ZS10 378 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 CEP97Q8IW35 865 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 CCDC89Q8N998 374 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 NAXEQ8NCW5 288 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 TRPC4APQ8TEL6 797 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 PPP4R1Q8TF05 950 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 ARHGEF2Q92974 986 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 ELMOD3Q96FG2 381 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 SLC26A6Q9BXS9 759 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 SEMA6AQ9H2E6 1030 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 APOBEC3GQ9HC16 384 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 MBNL1Q9NR56 388 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 SETD4Q9NVD3 440 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 RCC2Q9P258 522 aaKnown RBP4.02□□□□□ -1.77
BRCA1-229ENST00000621897 TSPYL4Q9UJ04 414 aa4.02□□□□□ -1.77
BRCA1-229ENST00000621897 A0A087X002 238 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 TEX13DA0A0J9YY54 714 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-229ENST00000621897 OR2M5A3KFT3 312 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 H0YIN7 160 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 TMEM189-UBE2V1I3L0A0 370 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 J3QR06 171 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 PLK4O00444 970 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 NR5A2O00482 541 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 CAVIN2O95810 425 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 TBX18O95935 607 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 IGHV4-38-2P0DP08 117 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 GNAZP19086 355 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 MAP2K2P36507 400 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 MSH2P43246 934 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 UBE2V1Q13404 147 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 MVPQ14764 893 aaKnown RBP4.01□□□□□ -1.77
BRCA1-229ENST00000621897 DUOXA1Q1HG43 343 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 CCDC184Q52MB2 194 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 NCEH1Q6PIU2 408 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 MMS22LQ6ZRQ5 1243 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 GET4Q7L5D6 327 aaPredicted RBP4.01□□□□□ -1.77
BRCA1-229ENST00000621897 KRT77Q7Z794 578 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 PXKQ7Z7A4 578 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 PTOV1Q86YD1 416 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 ZNF843Q8N446 348 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 TDRD7Q8NHU6 1098 aaKnown RBP4.01□□□□□ -1.77
BRCA1-229ENST00000621897 GSDMBQ8TAX9 411 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 PPM1MQ96MI6 270 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 PELI2Q9HAT8 420 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 NOL7Q9UMY1 257 aaKnown RBP4.01□□□□□ -1.77
BRCA1-229ENST00000621897 YIPF1Q9Y548 306 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 CACNA1FO60840 1977 aa4.01□□□□□ -1.77
BRCA1-229ENST00000621897 A0A0G2JLW4 131 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 OGG1O15527 345 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 ZBTB43O43298 467 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 RNASEH2AO75792 299 aaKnown RBP4□□□□□ -1.77
BRCA1-229ENST00000621897 TMEM63AO94886 807 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 NFKBIAP25963 317 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 GPR143P51810 404 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 TFAP4Q01664 338 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 EIF4A2Q14240 407 aaKnown RBP4□□□□□ -1.77
BRCA1-229ENST00000621897 GKAP1Q5VSY0 366 aaPredicted RBP4□□□□□ -1.77
BRCA1-229ENST00000621897 CASC1Q6TDU7 716 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 CFAP77Q6ZQR2 320 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 MFSD6Q6ZSS7 791 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 TMTC3Q6ZXV5 915 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 ZNF534Q76KX8 674 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 CREBRFQ8IUR6 639 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 WDR20Q8TBZ3 569 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 GAD1Q99259 594 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 RAD21L1Q9H4I0 556 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 EHD2Q9NZN4 543 aa4□□□□□ -1.77
BRCA1-229ENST00000621897 CLSPNQ9HAW4 1339 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 TMEM8BA6NDV4 472 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 LIPT2A6NK58 231 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 A6NL46 340 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ZNF821O75541 412 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 CCNDBP1O95273 360 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 HIST1H2ABP04908 130 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 RNF224P0DH78 156 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 HSPA1AP0DMV8 641 aaKnown RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 HSPA1BP0DMV9 641 aaKnown RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ZNF26P17031 533 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 HIST1H2ADP20671 130 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 CBLP22681 906 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 KRT9P35527 623 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 LRMPQ12912 555 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ASTE1Q2TB18 679 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ASPRV1Q53RT3 343 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 HYIQ5T013 277 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ACSM2BQ68CK6 577 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms