RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 SYTL3Q4VX76 610 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 TECRLQ5HYJ1 363 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 TMPRSS6Q8IU80 811 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 SFTPA2Q8IWL1 248 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 DEFB107AQ8IZN7 70 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 MIER2Q8N344 545 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 METTL6Q8TCB7 284 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 ULK4Q96C45 1275 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 MTERF1Q99551 399 aaKnown RBP10.39□□□□□ -0.75
VPS11-208ENST00000621676 MIPEPQ99797 713 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 MRPL57Q9BQC6 102 aaKnown RBP10.39□□□□□ -0.75
VPS11-208ENST00000621676 WWP1Q9H0M0 922 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 TAS2R1Q9NYW7 299 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 ADA2Q9NZK5 511 aa10.39□□□□□ -0.75
VPS11-208ENST00000621676 CHD5Q8TDI0 1954 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 EME2A4GXA9 379 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 PABPN1LA6NDY0 278 aaKnown RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 TPST1O60507 370 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 DCTN3O75935 186 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 NFATC1O95644 943 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 B3GALT4O96024 378 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 ATP5F1P24539 256 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 PGM1P36871 562 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 CCNFP41002 786 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 ZNF33AQ06730 810 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 TGFBIQ15582 683 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 FAM45BPQ6NSW5 357 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 IL27RAQ6UWB1 636 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 CYP2R1Q6VVX0 501 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 ZYG11AQ6WRX3 759 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 ADCK2Q7Z695 626 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 FAM45AQ8TCE6 357 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 PLEKHG4BQ96PX9 1271 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 PRDM16Q9HAZ2 1276 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 COMMD8Q9NX08 183 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 FBXL12Q9NXK8 326 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 PRKAG3Q9UGI9 489 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 CDH7Q9ULB5 785 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 SLC22A14Q9Y267 594 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 TRAF6Q9Y4K3 522 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 ANAPC1Q9H1A4 1944 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 AKAP10O43572 662 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 MT-ND1P03886 318 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 RB1P06400 928 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 PTGER1P34995 402 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 SPINT3P49223 89 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 CYP4F2P78329 520 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 B4GALNT1Q00973 533 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 CACNG1Q06432 222 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 NFE2L1Q14494 772 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 FRMD7Q6ZUT3 714 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 HPS6Q86YV9 775 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 SYTL1Q8IYJ3 562 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 GABPB2Q8TAK5 448 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 CSGALNACT1Q8TDX6 532 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 WDR60Q8WVS4 1066 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 TSPAN17Q96FV3 270 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 MRGPRX3Q96LB0 322 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 PHACTR1Q9C0D0 580 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 CDH19Q9H159 772 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 TTYH1Q9H313 450 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 XKR8Q9H6D3 395 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 TMPRSS11EQ9UL52 423 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 NR5A2O00482 541 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 GAPDHSO14556 408 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 PENKP01210 267 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 TPBGLP0DKB5 382 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 MTHFD2P13995 350 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 TSHRP16473 764 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 KPNB1Q14974 876 aaKnown RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 UNC50Q53HI1 259 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 CYB5D1Q6P9G0 228 aa10.38□□□□□ -0.75
VPS11-208ENST00000621676 RAB44Q7Z6P3 723 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 ZFHX2Q9C0A1 2572 aaPredicted RBP10.38□□□□□ -0.75
VPS11-208ENST00000621676 AP3B1O00203 1094 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 EGFP01133 1207 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 EPOP01588 193 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 HGFP14210 728 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 OPRD1P41143 372 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 HALP42357 657 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 RPIAP49247 311 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 CLCQ05315 142 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 INPP5AQ14642 412 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 PDGFRLQ15198 375 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 TTC31Q49AM3 519 aaPredicted RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 VPS26BQ4G0F5 336 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 ARMCX6Q7L4S7 300 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 MYO1HQ8N1T3 1032 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 NXPE1Q8N323 547 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 GPR156Q8NFN8 814 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 OR10Q1Q8NGQ4 319 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 STAG3L4Q8TBR4 150 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 RCN3Q96D15 328 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 MRPL38Q96DV4 380 aaKnown RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 PPCSQ9HAB8 311 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 MBNL1Q9NR56 388 aaKnown RBP10.37□□□□□ -0.75
VPS11-208ENST00000621676 ZDHHC7Q9NXF8 308 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 HS3ST2Q9Y278 367 aa10.37□□□□□ -0.75
VPS11-208ENST00000621676 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms