RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 PIP5K1BO14986 540 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 ARSAP15289 507 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 CD40LGP29965 261 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 RRM2P31350 389 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 C6orf141Q5SZD1 244 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 ZNF362Q5T0B9 420 aaPredicted RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 ZNF648Q5T619 568 aaPredicted RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 FAM183BPQ6ZVS7 135 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 CHERPQ8IWX8 916 aaKnown RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 NIPA2Q8N8Q9 360 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 RTL3Q8N8U3 475 aaKnown RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 CMASQ8NFW8 434 aaPredicted RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 H2AFY2Q9P0M6 372 aaPredicted RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 KCNE2Q9Y6J6 123 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 EDN1P05305 212 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 LTA4HP09960 611 aaKnown RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 PPP3CCP48454 512 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 STARP49675 285 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 ZNF235Q14590 738 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 PGM5Q15124 567 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 SLC35B4Q969S0 331 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 SIGLEC10Q96LC7 697 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 ANKRD60Q9BZ19 345 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 SLC22A4Q9H015 551 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 PLSCR3Q9NRY6 295 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 RBM22Q9NW64 420 aaKnown RBP eCLIP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 QPCTLQ9NXS2 382 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 SSR3Q9UNL2 185 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 PCNTO95613 3336 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 LOC100130705A0A1B0GUX0 176 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 IFRD1O00458 451 aaPredicted RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 KMOO15229 486 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 SIX3O95343 332 aaPredicted RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 DHFRP00374 187 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 FHP07954 510 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 INAVAQ3KP66 663 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 PIWIL1Q96J94 861 aaKnown RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 MAP6Q96JE9 813 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 MRPL57Q9BQC6 102 aaKnown RBP12.36□□□□□ -0.43
SYNRG-229ENST00000621136 TMEM138Q9NPI0 162 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 SPASTQ9UBP0 616 aa12.36□□□□□ -0.43
SYNRG-229ENST00000621136 TRAV6A0A075B6T7 132 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 TTC34A8MYJ7 566 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ACOX3O15254 700 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ZNF132P52740 706 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 NAPRTQ6XQN6 538 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 TAF8Q7Z7C8 310 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 PIGZQ86VD9 579 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 FAM109AQ8N4B1 249 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ZNF614Q8N883 585 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ZNF366Q8N895 744 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 C3orf58Q8NDZ4 430 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 WACQ9BTA9 647 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 SDCBP2Q9H190 292 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CCNB1IP1Q9NPC3 277 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 SLAMF7Q9NQ25 335 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ENDOD1O94919 500 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 POLD2P49005 469 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ARF5P84085 180 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 TMEM132DQ14C87 1099 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 XKR3Q5GH77 459 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 GPR158Q5T848 1215 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 PPP1R26Q5T8A7 1209 aaPredicted RBP12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CASP12Q6UXS9 341 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.35□□□□□ -0.43
SYNRG-229ENST00000621136 FAM83FQ8NEG4 500 aaPredicted RBP12.35□□□□□ -0.43
SYNRG-229ENST00000621136 TWIST2Q8WVJ9 160 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CLEC4DQ8WXI8 215 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 MED30Q96HR3 178 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CTRCQ99895 268 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 SLC30A2Q9BRI3 323 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 PDCD2LQ9BRP1 358 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 NANSQ9NR45 359 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 FBXO5Q9UKT4 447 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ICAM1P05362 532 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ITGB1P05556 798 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 BMP4P12644 408 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 LIMK2P53671 638 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
SYNRG-229ENST00000621136 INSCQ1MX18 579 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CYP27C1Q4G0S4 372 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 LCN1P1Q5VSP4 162 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 PSTKQ8IV42 348 aaKnown RBP12.35□□□□□ -0.43
SYNRG-229ENST00000621136 SLC45A3Q96JT2 553 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ANKRD6Q9Y2G4 727 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 FAM159BA6NKW6 160 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 F8W810 466 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 IPO13O94829 963 aaKnown RBP12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CHRNA1P02708 482 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 MT-ND2P03891 347 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
SYNRG-229ENST00000621136 TIE1P35590 1138 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CASP3P42574 277 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 PLEKHG6Q3KR16 790 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 ATF7IP2Q5U623 682 aa12.35□□□□□ -0.43
SYNRG-229ENST00000621136 CRTC1Q6UUV9 634 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms