RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 NSMCE2Q96MF7 247 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 SGIP1Q9BQI5 828 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC2A6Q9UGQ3 507 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 EGFL7Q9UHF1 273 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 FBXW11Q9UKB1 542 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 KCNE2Q9Y6J6 123 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 U3KQV3 271 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 CCDC154A6NI56 674 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 KCNU1A8MYU2 1149 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 H3BM21 787 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 VIPP01282 170 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ARSAP15289 507 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 DHPSP49366 369 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 BIKQ13323 160 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 GK3PQ14409 553 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC5A9Q2M3M2 681 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 TIGD2Q4W5G0 525 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 RBM44Q6ZP01 1051 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 CLDN19Q8N6F1 224 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 MYO19Q96H55 970 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 HIC2Q96JB3 615 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 APOLD1Q96LR9 279 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ZIC5Q96T25 663 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 GPR22Q99680 433 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 KCTD14Q9BQ13 255 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 WDR6Q9NNW5 1121 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 CRTAC1Q9NQ79 661 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 DDX18Q9NVP1 670 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 KLHL28Q9NXS3 571 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ETAA1Q9NY74 926 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 GNEQ9Y223 722 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 VWA7Q9Y334 891 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 RAD54BQ9Y620 910 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 HLA-DQA2P01906 255 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 FYNP06241 537 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC35E2BP0CK96 405 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 RAB10P61026 200 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 XIAPP98170 497 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 RALGDSQ12967 914 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 MACC1Q6ZN28 852 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 Q6ZVU0 165 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ADCK1Q86TW2 530 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 CEP97Q8IW35 865 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 SMOQ99835 787 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 PKP2Q99959 881 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 PCDHAC1Q9H158 963 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 TMEM245Q9H330 911 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ZDHHC7Q9NXF8 308 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 INSL6Q9Y581 213 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 COPG1Q9Y678 874 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 A0A1W2PQ45 241 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 A0A1W2PQY0 241 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ZW10O43264 779 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 GRID2O43424 1007 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 PRAMEF1O95521 474 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 NFATC1O95644 943 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ZNF8P17098 575 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 RRM2P31350 389 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 SSR2P43308 183 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 PXNP49023 591 aaPredicted RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC11A1P49279 550 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 KIAA0319Q5VV43 1072 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 CLEC14AQ86T13 490 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 STX19Q8N4C7 294 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 BADQ92934 168 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 AARSD1Q9BTE6 412 aaKnown RBP8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 OSBPL6Q9BZF3 934 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 PRDM16Q9HAZ2 1276 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ZSCAN32Q9NX65 697 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ANKRD6Q9Y2G4 727 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 PCDHGB5Q9Y5G0 923 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 STON1Q9Y6Q2 735 aa8.19□□□□□ -1.1
PTPDC1-204ENST00000620992 ZNF638Q14966 1978 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ALPIP09923 528 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 LTA4HP09960 611 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 TCF3P15923 654 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 WARSP23381 471 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ACTR1BP42025 376 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 TTPAP49638 278 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PLA2G16P53816 162 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 TAS2R39P59534 338 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ACTR1AP61163 376 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PURAQ00577 322 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 EIF2B5Q13144 721 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 DGCR6Q14129 220 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ADGRE1Q14246 886 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PAOXQ6QHF9 649 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 ALKAL1Q6UXT8 129 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 UBE2R2Q712K3 238 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 RAVER1Q8IY67 606 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PGAM4Q8N0Y7 254 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC2A13Q96QE2 648 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 GPR21Q99679 349 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 FAM83DQ9H4H8 585 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 CTPS2Q9NRF8 586 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 COMMD3-BMI1R4GMX3 469 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 TNS1Q9HBL0 1735 aaKnown RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 PRMT5O14744 637 aaPredicted RBP8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 GABRB3P28472 473 aa8.18□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC1A2P43004 574 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms