RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 MARCKSL1P49006 195 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 MAXP61244 160 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 ADCY2Q08462 1091 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 RALGDSQ12967 914 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 SETMARQ53H47 684 aaPredicted RBP7.49□□□□□ -1.21
CBWD1-228ENST00000619157 ANKRD20A8PQ5CZ79 823 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 TMCO4Q5TGY1 634 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 KCTD16Q68DU8 428 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 TMCO3Q6UWJ1 677 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 ABI3BPQ7Z7G0 1075 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 SRLQ86TD4 932 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 PRPF39Q86UA1 669 aaKnown RBP7.49□□□□□ -1.21
CBWD1-228ENST00000619157 PLD5Q8N7P1 536 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 SAP25Q8TEE9 199 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 MAML1Q92585 1016 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 CLIP3Q96DZ5 547 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 PPP1R16AQ96I34 528 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 RNF157Q96PX1 679 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 PSKH2Q96QS6 385 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 ELF4Q99607 663 aaPredicted RBP7.49□□□□□ -1.21
CBWD1-228ENST00000619157 ZNF670Q9BS34 389 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 HERPUD2Q9BSE4 406 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 DYRK4Q9NR20 520 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 MBNL1Q9NR56 388 aaKnown RBP7.49□□□□□ -1.21
CBWD1-228ENST00000619157 RCOR3Q9P2K3 495 aaPredicted RBP7.49□□□□□ -1.21
CBWD1-228ENST00000619157 DMTF1Q9Y222 760 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 COQ6Q9Y2Z9 468 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 PCDHGB2Q9Y5G2 931 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 PCNX2A6NKB5 2137 aa7.49□□□□□ -1.21
CBWD1-228ENST00000619157 MAP1BP46821 2468 aaKnown RBP7.49□□□□□ -1.21
CBWD1-228ENST00000619157 DMXL2Q8TDJ6 3036 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 A0A0U1RQS6 177 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 ARHGAP6O43182 974 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 TSPAN6O43657 245 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 PCDHGA12O60330 932 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 THEGLP0DJG4 465 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 HNRNPA2B1P22626 353 aaKnown RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 EPHA8P29322 1005 aaPredicted RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 IGFALSP35858 605 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 MMP12P39900 470 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 GARSP41250 739 aaKnown RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 SSR1P43307 286 aaKnown RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 RXRGP48443 463 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 HADHBP55084 474 aaKnown RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 PFN3P60673 137 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 RPS21P63220 83 aaKnown RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 SIM1P81133 766 aaPredicted RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 NSUN2Q08J23 767 aaKnown RBP eCLIP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 GALNT2Q10471 571 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 TRAF2Q12933 501 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 KRT81Q14533 505 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 RFTN1Q14699 578 aaPredicted RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 TAZQ16635 292 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 HADHQ16836 314 aaKnown RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 UGP2Q16851 508 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 TMEM52BQ4KMG9 183 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 SLC9A4Q6AI14 798 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 KIAA1161Q6NSJ0 714 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 IL27RAQ6UWB1 636 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 NPNTQ6UXI9 565 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 B4GALNT4Q76KP1 1039 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 MRGPRGQ86SM5 289 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 TTC7BQ86TV6 843 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 IQCHQ86VS3 1027 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 RHOT2Q8IXI1 618 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 PELI3Q8N2H9 469 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 TEX26Q8N6G2 289 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 PNPLA1Q8N8W4 532 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 KCTD6Q8NC69 237 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 ACRBPQ8NEB7 543 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 RAB7BQ96AH8 199 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 CENPTQ96BT3 561 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 ZNF599Q96NL3 588 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 PANX2Q96RD6 677 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 MGME1Q9BQP7 344 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 WRAP53Q9BUR4 548 aaKnown RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 CINPQ9BW66 212 aaPredicted RBP7.48□□□□□ -1.21
CBWD1-228ENST00000619157 CALN1Q9BXU9 219 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 SLC17A9Q9BYT1 436 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 NOD2Q9HC29 1040 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 PCDH12Q9NPG4 1184 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 GDF3Q9NR23 364 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 UCKL1Q9NWZ5 548 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 INTUQ9ULD6 942 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 PCDHA13Q9Y5I0 950 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 DMRT1Q9Y5R6 373 aa7.48□□□□□ -1.21
CBWD1-228ENST00000619157 LRRD1A4D1F6 860 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 HTRA2O43464 458 aaPredicted RBP7.47□□□□□ -1.21
CBWD1-228ENST00000619157 SDC3O75056 442 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 NDUFA10O95299 355 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 PDHA1P08559 390 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 KRT7P08729 469 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 TPM1P09493 284 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 ATXN1LP0C7T5 689 aaKnown RBP7.47□□□□□ -1.21
CBWD1-228ENST00000619157 FTH1P19P0C7X4 201 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 MAKP20794 623 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 NUDT1P36639 197 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 ARHGAP25P42331 645 aa7.47□□□□□ -1.21
CBWD1-228ENST00000619157 ETV4P43268 484 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms