RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 ZFC3H1O60293 1989 aaKnown RBP10.71□□□□□ -0.7
UPF3A-212ENST00000619079 FAM92AA1XBS5 289 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 MYADML2A6NDP7 307 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 HAT1O14929 419 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SNX2O60749 519 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 CAPN15O75808 1086 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 LRIG2O94898 1065 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 ANXA6P08133 673 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 HOXB6P17509 224 aaKnown RBP10.7□□□□□ -0.7
UPF3A-212ENST00000619079 AGXTP21549 392 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 ALDH4A1P30038 563 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 UGT2B10P36537 528 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SULT1E1P49888 294 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SEPHS1P49903 392 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 CLCN5P51795 746 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 PLK1P53350 603 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 NCS1P62166 190 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 LSM3P62310 102 aaKnown RBP10.7□□□□□ -0.7
UPF3A-212ENST00000619079 HERVK_113P63132 956 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 EMX2Q04743 252 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 PRKCDQ05655 676 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SOWAHAQ2M3V2 549 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SULT1C3Q6IMI6 304 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 ZCCHC8Q6NZY4 707 aaKnown RBP10.7□□□□□ -0.7
UPF3A-212ENST00000619079 RFPL4BQ6ZWI9 263 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 PHYKPLQ8IUZ5 450 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 PPTC7Q8NI37 304 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 FBLIM1Q8WUP2 373 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 TWIST2Q8WVJ9 160 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 TUBGCP3Q96CW5 907 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 ERVK-6Q9BXR3 956 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 FZD8Q9H461 694 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 AAR2Q9Y312 384 aaKnown RBP10.7□□□□□ -0.7
UPF3A-212ENST00000619079 AZIN1O14977 448 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 PIP5K1BO14986 540 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SLC16A6O15403 523 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SNX4O95219 450 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 ANGPTL1O95841 491 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 MMP3P08254 477 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 HGFP14210 728 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 JUNDP17535 347 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 M6PRP20645 277 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 BDNFP23560 247 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 PSMB9P28065 219 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 S100A5P33763 92 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SLC26A2P50443 739 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 AIF1P55008 147 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 CXCR4P61073 352 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 TMEM132DQ14C87 1099 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 CLCA4Q14CN2 919 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 KYAT1Q16773 422 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 FUT11Q495W5 492 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 ATAD3CQ5T2N8 411 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 ARHGAP17Q68EM7 881 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 LAIR2Q6ISS4 152 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 RAB44Q7Z6P3 723 aaPredicted RBP10.7□□□□□ -0.7
UPF3A-212ENST00000619079 RBM23Q86U06 439 aaKnown RBP10.7□□□□□ -0.7
UPF3A-212ENST00000619079 HORMAD1Q86X24 394 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 TMEM199Q8N511 208 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 AMER2Q8N7J2 671 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 NETO2Q8NC67 525 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 HCAR2Q8TDS4 363 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 TTC9Q92623 222 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 SNTG2Q9NY99 539 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 HSPE1-MOB4S4R3N1 261 aa10.7□□□□□ -0.7
UPF3A-212ENST00000619079 PNMA8CA0A1B0GUJ8 204 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 PABPN1LA6NDY0 278 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 INO80B-WBP1J3KQ70 363 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 ADAMTS4O75173 837 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 PRKD3O94806 890 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 MED26O95402 600 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 STAG3L1P0CL83 205 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 PIGAP37287 484 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 BCAT1P54687 386 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 P2RX3P56373 397 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 SLC14A2Q15849 920 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 TYSND1Q2T9J0 566 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 KANK2Q63ZY3 851 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 EEF1DP3Q658K8 133 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 RPS27LQ71UM5 84 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 ACOT1Q86TX2 421 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 RNF135Q8IUD6 432 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 HID1Q8IV36 788 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 PCSK9Q8NBP7 692 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 IL17RDQ8NFM7 739 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 SEPT1Q8WYJ6 367 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 EMID1Q96A84 441 aaPredicted RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 TEKT5Q96M29 485 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 CLPBQ9H078 707 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 DUSP21Q9H596 190 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 DIABLOQ9NR28 239 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 STMN3Q9NZ72 180 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 IL37Q9NZH6 218 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 MKLN1Q9UL63 735 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 WBP11Q9Y2W2 641 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 GRIP1Q9Y3R0 1128 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 GPR45Q9Y5Y3 372 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 KIAA0100Q14667 2235 aaKnown RBP10.69□□□□□ -0.7
UPF3A-212ENST00000619079 LOC105371267A0A1B0GV96 52 aa10.69□□□□□ -0.7
UPF3A-212ENST00000619079 EFCAB9A8MZ26 197 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms