RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	CIPC	Q9C0C6	399 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	OCEL1	Q9H607	264 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	AGPAT4	Q9NRZ5	378 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	LEF1	Q9UJU2	399 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	MYRF	Q9Y2G1	1151 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	ZNF711	Q9Y462	761 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	ANKRD12	Q6UB98	2062 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944		H3BNH8	94 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	DLGAP1	O14490	977 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	SMAD6	O43541	496 aa	Known RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	ESR1	P03372	595 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	PSMA3	P25788	255 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	HSPA7	P48741	367 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	CLCN4	P51793	760 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	ZXDB	P98169	803 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	DYNC1I2	Q13409	638 aa	Known RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	BFSP2	Q13515	415 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	PABPC1L	Q4VXU2	614 aa	Known RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	SPOUT1	Q5T280	376 aa	Known RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	B3GNT6	Q6ZMB0	384 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	GOLGA7	Q7Z5G4	137 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	SERPINA9	Q86WD7	417 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	APCDD1	Q8J025	514 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	CRIPAK	Q8N1N5	446 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	TFAP2C	Q92754	450 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	RMND5B	Q96G75	393 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	MYRFL	Q96LU7	910 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	TMEM175	Q9BSA9	504 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	APOL5	Q9BWW9	433 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	TRIM54	Q9BYV2	358 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	RBM38	Q9H0Z9	239 aa	Known RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	P2RY12	Q9H244	342 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	NSUN3	Q9H649	340 aa	Known RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	HMX1	Q9NP08	348 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	RIC8B	Q9NVN3	520 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	SMOX	Q9NWM0	555 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	HACD3	Q9P035	362 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	EVL	Q9UI08	416 aa	Predicted RBP	11.06	□□□□□ -0.64
TP53-223	ENST00000618944	VPS51	Q9UID3	782 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	DHRS7	Q9Y394	339 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	PRSS21	Q9Y6M0	314 aa		11.06	□□□□□ -0.64
TP53-223	ENST00000618944	MKI67	P46013	3256 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	OR7A17	O14581	309 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	PRMT5	O14744	637 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	EED	O75530	441 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	MTPN	P58546	118 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CREB5	Q02930	508 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CACNG1	Q06432	222 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	MAP7	Q14244	749 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ABRAXAS2	Q15018	415 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	NR6A1	Q15406	480 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	RFTN2	Q52LD8	501 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	SGO1	Q5FBB7	561 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	AARS2	Q5JTZ9	985 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ZNF786	Q8N393	782 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	TRPV3	Q8NET8	790 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ZNF461	Q8TAF7	563 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	LKAAEAR1	Q8TD35	194 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CYGB	Q8WWM9	190 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	AUTS2	Q8WXX7	1259 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	C17orf80	Q9BSJ5	609 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	MRPL9	Q9BYD2	267 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ABCG8	Q9H221	673 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	SOX17	Q9H6I2	414 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CWH43	Q9H720	699 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	IPPK	Q9H8X2	491 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	AFF4	Q9UHB7	1163 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	TET1	Q8NFU7	2136 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ANKRD33B	A6NCL7	494 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	FFAR3	O14843	346 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	GPR42	O15529	346 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	FFAR2	O15552	330 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	RSL1D1	O76021	490 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	SLC25A14	O95258	325 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CLDN7	O95471	211 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	PRAMEF1	O95521	474 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	HOXD10	P28358	340 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	PCSK6	P29122	969 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	OR4D2	P58180	307 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CDH18	Q13634	790 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	GTF2H2	Q13888	395 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	SELPLG	Q14242	412 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	AP5B1	Q2VPB7	878 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	PDCD4	Q53EL6	469 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ARMC12	Q5T9G4	340 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	TXNDC8	Q6A555	127 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	GTF2H2C	Q6P1K8	395 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	FAM117B	Q6P1L5	589 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	MILR1	Q7Z6M3	343 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	FAM126B	Q8IXS8	530 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	BIRC7	Q96CA5	298 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CENPN	Q96H22	339 aa	Predicted RBP	11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ZNF382	Q96SR6	550 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	ANKRD60	Q9BZ19	345 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	BRINP2	Q9C0B6	783 aa		11.05	□□□□□ -0.64
TP53-223	ENST00000618944	CLPB	Q9H078	707 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms