RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CSPG4P5Q96PW8 444 aa11.96□□□□□ -0.49
SRRT-216ENST00000618262 SPON2Q9BUD6 331 aa11.96□□□□□ -0.49
SRRT-216ENST00000618262 NTMT1Q9BV86 223 aa11.96□□□□□ -0.49
SRRT-216ENST00000618262 ATP13A2Q9NQ11 1180 aa11.96□□□□□ -0.49
SRRT-216ENST00000618262 GDF3Q9NR23 364 aa11.96□□□□□ -0.49
SRRT-216ENST00000618262 MYO10Q9HD67 2058 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 TTC24A2A3L6 582 aaPredicted RBP11.96□□□□□ -0.5
SRRT-216ENST00000618262 PSMD9O00233 223 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 PSMG1O95456 288 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 ERCC2P18074 760 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 CD72P21854 359 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 AIF1P55008 147 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 PRKCQQ04759 706 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 SFTPA1Q8IWL2 248 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 CBARPQ8N350 705 aaPredicted RBP11.96□□□□□ -0.5
SRRT-216ENST00000618262 AVL9Q8NBF6 648 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 SMRP1Q8NCR6 262 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 WFDC5Q8TCV5 224 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 CASKIN2Q8WXE0 1202 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 AKAP1Q92667 903 aaKnown RBP eCLIP11.96□□□□□ -0.5
SRRT-216ENST00000618262 C11orf24Q96F05 449 aaPredicted RBP11.96□□□□□ -0.5
SRRT-216ENST00000618262 FRMD6Q96NE9 622 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 LGMNQ99538 433 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 MENTQ9BUN1 341 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 RBM12Q9NTZ6 932 aaKnown RBP11.96□□□□□ -0.5
SRRT-216ENST00000618262 DIMT1Q9UNQ2 313 aaKnown RBP11.96□□□□□ -0.5
SRRT-216ENST00000618262 NUP205Q92621 2012 aa11.96□□□□□ -0.5
SRRT-216ENST00000618262 A0A0D9SEW6 157 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 C3orf70A6NLC5 250 aaPredicted RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 HEPACAM2A8MVW5 462 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 BET1O15155 118 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 TBL1XO60907 577 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 F9P00740 461 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 IFNB1P01574 187 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 TFAP2AP05549 437 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 NDUFV2P19404 249 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 ARL4AP40617 200 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 CDKN2BP42772 138 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 HCAR3P49019 387 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 RAP1GDS1P52306 607 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 STX1BP61266 288 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 IER5LQ5T953 404 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 POLNQ7Z5Q5 900 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 ZNF619Q8N2I2 560 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 Q8N9G6 341 aaPredicted RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 HLA-CQ95604 372 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 ZNF845Q96IR2 970 aaPredicted RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 CDCA3Q99618 268 aaPredicted RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 TDRD1Q9BXT4 1180 aaKnown RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 CD207Q9UJ71 328 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 GNPTGQ9UJJ9 305 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 NFS1Q9Y697 457 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 TEX51A0A1B0GUA7 166 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 ZNF197O14709 1029 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 PHF2O75151 1096 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 SNAP29O95721 258 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 ETS1P14921 441 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 GLDCP23378 1020 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 CHN2P52757 468 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 GPX6P59796 221 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 FOLH1Q04609 750 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 SLC10A2Q12908 348 aaPredicted RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 CYP2A13Q16696 494 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 LINGO4Q6UY18 593 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 VSIG1Q86XK7 387 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 TERB1Q8NA31 727 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 TRIM63Q969Q1 353 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 RAB7BQ96AH8 199 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 MSLNLQ96KJ4 702 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 LRGUKQ96M69 825 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 FERMT1Q9BQL6 677 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 BCL2L14Q9BZR8 327 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 TINAGL1Q9GZM7 467 aaPredicted RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 TMEM245Q9H330 911 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 MCCC2Q9HCC0 563 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 ARHGEF4Q9NR80 690 aa11.95□□□□□ -0.5
SRRT-216ENST00000618262 OLA1Q9NTK5 396 aaKnown RBP11.95□□□□□ -0.5
SRRT-216ENST00000618262 MTCL1Q9Y4B5 1905 aaKnown RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 OR5K3A6NET4 321 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 KCNK1O00180 336 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 PSTPIP1O43586 416 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 AP1G1O43747 822 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 SULT1C4O75897 302 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TACR2P21452 398 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 OR1E1P30953 314 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TTKP33981 857 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 CCR10P46092 362 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 CAPZA2P47755 286 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 NPY2RP49146 381 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 SLC11A2P49281 568 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 OCA2Q04671 838 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TRIM16LQ309B1 348 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 PLA2G4EQ3MJ16 856 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 TFDP3Q5H9I0 405 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 LY6G5CQ5SRR4 150 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 PQLC3Q8N755 202 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 OR2W6PQ8NHA6 318 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 DNAJB8Q8NHS0 232 aa11.94□□□□□ -0.5
SRRT-216ENST00000618262 MAFAQ8NHW3 353 aaPredicted RBP11.94□□□□□ -0.5
SRRT-216ENST00000618262 DENND1AQ8TEH3 1009 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms