RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ELFN1P0C7U0 828 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 LINC00032P0C843 101 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 LAMP2P13473 410 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 IGFBP4P22692 258 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 HNRNPH1P31943 449 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 PIK3CGP48736 1102 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 DNAJB13P59910 316 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 C2orf27AQ580R0 203 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 IER5LQ5T953 404 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 FBXL19Q6PCT2 694 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 BRAT1Q6PJG6 821 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 CYHR1Q6ZMK1 362 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.69□□□□□ -1.18
NEK3-207ENST00000617054 TERB1Q8NA31 727 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 CFAP61Q8NHU2 1237 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 ARRDC3Q96B67 414 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 FAM129BQ96TA1 746 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 COPS8Q99627 209 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 BTBD10Q9BSF8 475 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 LRMDAQ9H2I8 198 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 THG1LQ9NWX6 298 aaKnown RBP7.69□□□□□ -1.18
NEK3-207ENST00000617054 GDE1Q9NZC3 331 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 ZNF225Q9UK10 706 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 PPIL1Q9Y3C6 166 aa7.69□□□□□ -1.18
NEK3-207ENST00000617054 MYO10Q9HD67 2058 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SCN8AQ9UQD0 1980 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 TRBV5-4A0A0C4DH59 114 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 GSC2O15499 205 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 NPHS1O60500 1241 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 ENTPD5O75356 428 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 H2AFYO75367 372 aaKnown RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 ALOX15P16050 662 aaPredicted RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 GM2AP17900 193 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 CALB2P22676 271 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 PBLDP30039 288 aaPredicted RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 TIE1P35590 1138 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 CLCQ05315 142 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 RALGDSQ12967 914 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 ARMC3Q5W041 872 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 CERS6Q6ZMG9 384 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 FRA10AC1Q70Z53 315 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SLC22A9Q8IVM8 553 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 CNPY4Q8N129 248 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 NKAPQ8N5F7 415 aaKnown RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 TEX9Q8N6V9 391 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 LMNTD1Q8N9Z9 388 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 CORO1CQ9ULV4 474 aaPredicted RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 CDYLQ9Y232 598 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 VPS9D1Q9Y2B5 631 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 L3MBTL1Q9Y468 752 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 PRKAB1Q9Y478 270 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 DNAJC15Q9Y5T4 150 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 GOLGA4Q13439 2230 aaKnown RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 F8W8V4 182 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SDHDO14521 159 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SPINT1O43278 529 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SNX2O60749 519 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 KAT7O95251 611 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 PSMC3P17980 439 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 VIPR1P32241 457 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 MSX2P35548 267 aaPredicted RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 SLC26A3P40879 764 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SKIV2L2P42285 1042 aaKnown RBP7.68□□□□□ -1.18
NEK3-207ENST00000617054 PSMD8P48556 350 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 HSPA7P48741 367 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 RAB30Q15771 203 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 RBBP7Q16576 425 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 TXNDC11Q6PKC3 985 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SBSNQ6UWP8 590 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 LIPIQ6XZB0 460 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 DDIASQ8IXT1 998 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 CHPFQ8IZ52 775 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 FAM13CQ8NE31 585 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 RHEBL1Q8TAI7 183 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 THTPAQ9BU02 230 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 ZNF576Q9H609 170 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SUN2Q9UH99 717 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 TAGLN3Q9UI15 199 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 ZMYM5Q9UJ78 669 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 GNPTGQ9UJJ9 305 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 SLC27A6Q9Y2P4 619 aa7.68□□□□□ -1.18
NEK3-207ENST00000617054 H0Y3Z8 333 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 AIM2O14862 343 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 LTBRP36941 435 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 NSG1P42857 185 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CTSCP53634 463 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 ADARP55265 1226 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 ASPHQ12797 758 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 HNRNPA1L2Q32P51 320 aaKnown RBP7.67□□□□□ -1.18
NEK3-207ENST00000617054 PLA2G4EQ3MJ16 856 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CES5AQ6NT32 575 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 ZBTB2Q8N680 514 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 OR9I1Q8NGQ6 314 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 NUDT8Q8WV74 236 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 KLK6Q92876 244 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 PYCR2Q96C36 320 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 CCDC126Q96EE4 140 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 L3HYPDHQ96EM0 354 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 TTC1Q99614 292 aa7.67□□□□□ -1.18
NEK3-207ENST00000617054 EGFL8Q99944 293 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms