RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 HMBSP08397 361 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 HSMCR30P0CW71 290 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 OAZ1P54368 228 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 RPS3AP61247 264 aaKnown RBP13.02□□□□□ -0.32
MSH6-214ENST00000616033 NR6A1Q15406 480 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 SKIV2LQ15477 1246 aaKnown RBP13.02□□□□□ -0.32
MSH6-214ENST00000616033 GTF2IRD2BQ6EKJ0 949 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 GTF2IRD2Q86UP8 949 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 UNC93AQ86WB7 457 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 NATD1Q8N6N6 113 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 MRGPRX2Q96LB1 330 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 HGH1Q9BTY7 390 aa13.02□□□□□ -0.32
MSH6-214ENST00000616033 BBIP1A8MTZ0 92 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 ZNF487B1APH4 448 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 SLC1A7O00341 560 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 DFNA5O60443 496 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 ALPLP05186 524 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 TGFB3P10600 412 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 IL12AP29459 219 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 GEMP55040 296 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 RAPSNQ13702 412 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 NPTX1Q15818 432 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 SOWAHCQ53LP3 525 aaPredicted RBP13.02□□□□□ -0.33
MSH6-214ENST00000616033 AHSA2Q719I0 299 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 MTFMTQ96DP5 389 aaKnown RBP13.02□□□□□ -0.33
MSH6-214ENST00000616033 ZHX1-C8orf76Q96EF9 292 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 MCMBPQ9BTE3 642 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 SCHIP1Q9P0W5 487 aaPredicted RBP13.02□□□□□ -0.33
MSH6-214ENST00000616033 ERVK-11Q9UQG0 969 aa13.02□□□□□ -0.33
MSH6-214ENST00000616033 NPEPPSL1A6NEC2 478 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 MEIS3P2A8K0S8 358 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 USP2O75604 605 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 CPNE6O95741 557 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 SPNP16150 400 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 CBLBQ13191 982 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 C18orf21Q32NC0 220 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSH6-214ENST00000616033 TTC23Q5W5X9 447 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 PAQR3Q6TCH7 311 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 IL27RAQ6UWB1 636 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 PAQR9Q6ZVX9 377 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSH6-214ENST00000616033 FAM20CQ8IXL6 584 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ABCD2Q9UBJ2 740 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 LEF1Q9UJU2 399 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 SPEF1Q9Y4P9 236 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 POLR3HQ9Y535 204 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 ORC6Q9Y5N6 252 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 LOC100130705A0A1B0GUX0 176 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 TCRBV5S2A0A599 114 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 J3KR12 359 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ICMTO60725 284 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 KRT8P05787 483 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 LCKP06239 509 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 CNPP09543 421 aaKnown RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 GSTM2P28161 218 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ADCYAP1R1P41586 468 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 SERPINB10P48595 397 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 SERPINH1P50454 418 aaKnown RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 DAOAP59103 153 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 GRSF1Q12849 480 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSH6-214ENST00000616033 GTDC1Q4AE62 458 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 KIAA0319Q5VV43 1072 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 PLPPR4Q7Z2D5 763 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ANKRD46Q86W74 232 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 PCED1BQ96HM7 432 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 PRRG3Q9BZD7 231 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 GPN2Q9H9Y4 310 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 CD274Q9NZQ7 290 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 UGT2A1Q9Y4X1 527 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ANK1P16157 1881 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 H3BRB1 525 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 H3BUI4 141 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 TFECO14948 347 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 CCNKO75909 580 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 GUCA1CO95843 209 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ANXA6P08133 673 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ABCB1P08183 1280 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 PFKLP17858 780 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 WEE1P30291 646 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 RAB15P59190 212 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 LILRA4P59901 499 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 TP53BP2Q13625 1128 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 TTLL4Q14679 1199 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 CTF1Q16619 201 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 TMEM179BQ7Z7N9 219 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 FLCNQ8NFG4 579 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 STON2Q8WXE9 905 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 DUS3LQ96G46 650 aaKnown RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ACTR8Q9H981 624 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 ZBTB20Q9HC78 741 aaPredicted RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 IL37Q9NZH6 218 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 DNMT3BQ9UBC3 853 aaKnown RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 EIF2B4Q9UI10 523 aaKnown RBP13.01□□□□□ -0.33
MSH6-214ENST00000616033 ENPP5Q9UJA9 477 aa13.01□□□□□ -0.33
MSH6-214ENST00000616033 TNFRSF10AO00220 468 aa13□□□□□ -0.33
MSH6-214ENST00000616033 UGT2B11O75310 529 aa13□□□□□ -0.33
MSH6-214ENST00000616033 G6PDP11413 515 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms