RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	CLEC18B	Q6UXF7	455 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	SPOCD1	Q6ZMY3	1216 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	B4GALNT4	Q76KP1	1039 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	PTRH1	Q86Y79	214 aa	Known RBP	10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	KMT5C	Q86Y97	462 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	KATNAL2	Q8IYT4	538 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	RASGEF1A	Q8N9B8	481 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	CLEC18C	Q8NCF0	446 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	GALNT6	Q8NCL4	622 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	ZFPM2	Q8WW38	1151 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	UBXN4	Q92575	508 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	P3H4	Q92791	437 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	ABHD17A	Q96GS6	310 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	TTC25	Q96NG3	672 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	CD180	Q99467	661 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	BPIFA1	Q9NP55	256 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	UBP1	Q9NZI7	540 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	KCND3	Q9UK17	655 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	CROT	Q9UKG9	612 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	TRHDE	Q9UKU6	1024 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	PCDHB3	Q9Y5E6	796 aa		10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.91	□□□□□ -0.66
CBWD1-222	ENST00000613508	NBAS	A2RRP1	2371 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	hCG_1818297	A0A087WSY0	165 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	GLYATL1P3	A0A0U1RQE8	302 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	HACD1	B0YJ81	288 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	C21orf140	B9A014	251 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	SPAG6	O75602	509 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	POP7	O75817	140 aa	Known RBP	10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	KIAA0754	O94854	1291 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	LCA5L	O95447	670 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	CHRNA4	P43681	627 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	TNNT3	P45378	269 aa	Predicted RBP	10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	SEPHS1	P49903	392 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	CTSC	P53634	463 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	ADCY2	Q08462	1091 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	TBX2	Q13207	712 aa	Predicted RBP	10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	XRCC4	Q13426	336 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	NOMO1	Q15155	1222 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	SKIDA1	Q1XH10	827 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	LACTB2	Q53H82	288 aa	Predicted RBP	10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	GPRC6A	Q5T6X5	926 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	PPP1R3B	Q86XI6	285 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	RASGRP3	Q8IV61	690 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	CNGA4	Q8IV77	575 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	RCOR2	Q8IZ40	523 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	ZNF567	Q8N184	647 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	CARF	Q8N187	725 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	GDAP1	Q8TB36	358 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	STAMBPL1	Q96FJ0	436 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	C19orf43	Q9BQ61	176 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	PADI1	Q9ULC6	663 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	PKP3	Q9Y446	797 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	HYOU1	Q9Y4L1	999 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	ALG6	Q9Y672	507 aa		10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	MRPS18B	Q9Y676	258 aa	Known RBP	10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	USP9Y	O00507	2555 aa	Predicted RBP	10.9	□□□□□ -0.66
CBWD1-222	ENST00000613508	USP9X	Q93008	2570 aa	Predicted RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	IGHV5-51	A0A0C4DH38	117 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	CYSRT1	A8MQ03	144 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	AGAP14	A8MT82	685 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT1A9	O60656	530 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	CREG1	O75629	220 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	CCNYL3	P0C7X3	344 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	PYGM	P11217	842 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	MTHFD1	P11586	935 aa	Known RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT1A6	P19224	532 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT1A1	P22309	533 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT1A4	P22310	534 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	PPP2R5E	Q16537	467 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	LONRF2	Q1L5Z9	754 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	COLEC12	Q5KU26	742 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	ATP1A1-AS1	Q5TC04	95 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	C11orf63	Q6NUN7	778 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	TCTN3	Q6NUS6	607 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	IRGC	Q6NXR0	463 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	C16orf46	Q6P387	395 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	FAM151B	Q6UXP7	276 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	FAM92B	Q6ZTR7	304 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	BBS12	Q6ZW61	710 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	GLT6D1	Q7Z4J2	308 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	APLF	Q8IW19	511 aa	Predicted RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	SLC25A41	Q8N5S1	370 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	BEND7	Q8N7W2	519 aa	Predicted RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	GPR150	Q8NGU9	434 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	SEC14L1	Q92503	715 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	GPR87	Q9BY21	358 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT1A7	Q9HAW7	530 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT1A10	Q9HAW8	530 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	UGT1A8	Q9HAW9	530 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	PDE7B	Q9NP56	450 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	ZNF71	Q9NQZ8	489 aa	Predicted RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	KLHL8	Q9P2G9	620 aa	Predicted RBP	10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	LNPEP	Q9UIQ6	1025 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	ACSL5	Q9ULC5	683 aa		10.89	□□□□□ -0.67
CBWD1-222	ENST00000613508	POLH	Q9Y253	713 aa		10.89	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms