RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ERVW-1Q9UQF0 538 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 AP1S2P56377 157 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 ADAM17P78536 824 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 ECT2LQ008S8 904 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 SP3Q02447 781 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 RANBP3LQ86VV4 465 aaPredicted RBP17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 GPR135Q8IZ08 494 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 TMCO6Q96DC7 493 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 C11orf24Q96F05 449 aaPredicted RBP17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 CRELD1Q96HD1 420 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 IGSF9Q9P2J2 1179 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 DNAJB4Q9UDY4 337 aa17.24■□□□□ 0.35
HMGXB3-206ENST00000613459 TEX46H3BTG2 121 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 GABRDO14764 452 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 CCNB2O95067 398 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 PTGER3P43115 390 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 IL23RQ5VWK5 629 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 SLC43A3Q8NBI5 491 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 IPCEF1Q8WWN9 437 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 RBM7Q9Y580 266 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 A0A1B0GVM2 712 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 TCAF2A6NFQ2 919 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 E7ENX8 843 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 C2orf80Q0P641 193 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 TAF10Q12962 218 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 GRB14Q14449 540 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 DAW1Q8N136 415 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 GPR21Q99679 349 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 CCDC177Q9NQR7 707 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 TAS2R7Q9NYW3 318 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 CFAP97Q9P2B7 532 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 PMM2O15305 246 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 RPL26P61254 145 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 SUZ12Q15022 739 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 ZNF311Q5JNZ3 666 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 ZCCHC12Q6PEW1 402 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 USP43Q70EL4 1123 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 ZBTB46Q86UZ6 589 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 IRF2BP1Q8IU81 584 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 CNTN6Q9UQ52 1028 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 PCDHA2Q9Y5H9 948 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 OR14I1A6ND48 311 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 ANXA4P09525 319 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 PRR5P85299 388 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 SEMA5AQ13591 1074 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 CAMK1Q14012 370 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 RFTN1Q14699 578 aaPredicted RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 ECM1Q16610 540 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 AZIN2Q96A70 460 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 CLIP3Q96DZ5 547 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 IQCMA0A1B0GVH7 501 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 HNRNPDQ14103 355 aaKnown RBP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 SLC24A5Q71RS6 500 aa17.23■□□□□ 0.35
HMGXB3-206ENST00000613459 AIREO43918 545 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 CD247P20963 164 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 E2F2Q14209 437 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 GRIK5Q16478 980 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 ARL13AQ5H913 290 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 DQX1Q8TE96 717 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 DCAKDQ8WVC6 231 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 PPM1MQ96MI6 270 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 NODALQ96S42 347 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 OAS3Q9Y6K5 1087 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 RIMS1Q86UR5 1692 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 ITPKAP23677 461 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 CORO1AP31146 461 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 CCNFP41002 786 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 ALDH3A2P51648 485 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 RGS8P57771 180 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 THOC7Q6I9Y2 204 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 KIAA0930Q6ICG6 404 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 FITM2Q8N6M3 262 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 OR8H1Q8NGG4 311 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 RAB2BQ8WUD1 216 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 PRICKLE1Q96MT3 831 aaPredicted RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 NID2Q14112 1375 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 PRORSD1PA6NEY8 169 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 CLDN4O14493 209 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 C1RP00736 705 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 TIE1P35590 1138 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 SEPHS1P49903 392 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 EIPR1Q53HC9 387 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 GPR158Q5T848 1215 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 LAPTM4BQ86VI4 370 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 GPALPP1Q8IXQ4 340 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 TCF25Q9BQ70 676 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 RAB11FIP5Q9BXF6 653 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 PPIEQ9UNP9 301 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 GRIP1Q9Y3R0 1128 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 MRPL42Q9Y6G3 142 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 FAM172BPA6NC97 362 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 KCNU1A8MYU2 1149 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 PDCD5O14737 125 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 POP4O95707 220 aaKnown RBP17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 HSD17B2P37059 387 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 BRCC3P46736 316 aa17.22■□□□□ 0.35
HMGXB3-206ENST00000613459 RPIAP49247 311 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms