RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 ZBTB6Q15916 424 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 HIST2H2ACQ16777 129 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-213ENST00000613099 OR6B2Q6IFH4 312 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 SCRN2Q96FV2 425 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 ERVK-19Q9WJR5 959 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 PPEF1O14829 653 aaPredicted RBP4.91□□□□□ -1.62
VPS13D-213ENST00000613099 AP2A1O95782 977 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 LHCGRP22888 699 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 PAX6P26367 422 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 C19orf57Q0VDD7 668 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 RETSATQ6NUM9 610 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 ULK3Q6PHR2 472 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 SPESP1Q6UW49 350 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 C11orf96Q7Z7L8 435 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 CLRN3Q8NCR9 226 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 OR10Z1Q8NGY1 313 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 FAM84AQ96KN4 292 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 SLC38A2Q96QD8 506 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 CCDC106Q9BWC9 280 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 PPP1R14DQ9NXH3 145 aa4.91□□□□□ -1.62
VPS13D-213ENST00000613099 MSI1O43347 362 aaKnown RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 CYP7B1O75881 506 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 BMP3P12645 472 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 NFKB1P19838 968 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PTGIRP43119 386 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PLA2G16P53816 162 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 DPYSL3Q14195 570 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 DLGAP5Q15398 846 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 TKFCQ3LXA3 575 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SLC22A10Q63ZE4 541 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 FBXO42Q6P3S6 717 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 ACBD4Q8NC06 268 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 LGALS12Q96DT0 336 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SLC2A11Q9BYW1 496 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 MROH8Q9H579 483 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 FAM221BA6H8Z2 402 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 TBX3O15119 743 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PCCAP05165 728 aaPredicted RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 CYP2A7P20853 494 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SLC13A2Q13183 592 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 GRK1Q15835 563 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 DCP1BQ8IZD4 617 aaKnown RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 OR14K1Q8NGZ2 314 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 CEP76Q8TAP6 659 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 ACTL9Q8TC94 416 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 ZUFSPQ96AP4 578 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SLC45A3Q96JT2 553 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 HSD3B7Q9H2F3 369 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 ZFR2Q9UPR6 939 aaKnown RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 TUBGCP6Q96RT7 1819 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SHOXO15266 292 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 HOXD10P28358 340 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 ERVFC1P60507 584 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 OFCC1Q8IZS5 231 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 VWA5B2Q8N398 1253 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 C11orf65Q8NCR3 313 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 BEST4Q8NFU0 473 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 MAP6Q96JE9 813 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 ZNRF3Q9ULT6 936 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SUPT3HB4E1H0 165 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 RAB3DO95716 219 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PNPP00491 289 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 MAP2K3P46734 347 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SKP1P63208 163 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 XKR9Q5GH70 373 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PIK3R6Q5UE93 754 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 AHSA2Q719I0 299 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SYNPOQ8N3V7 929 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 LINC00469Q8N7U9 141 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 RBPMSQ93062 196 aaKnown RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 COL21A1Q96P44 957 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 OSGEPQ9NPF4 335 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 CD300AQ9UGN4 299 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 MFHAS1Q9Y4C4 1052 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 KNTC1P50748 2209 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 A0A096LPK6 155 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 HPRP00739 348 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 GAD2Q05329 585 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 FGL1Q08830 312 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PGBD3Q8N328 593 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SLC47A1Q96FL8 570 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 MOGAT1Q96PD6 335 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PCDHB5Q9Y5E4 795 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 AP1M2Q9Y6Q5 423 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 NUPL2O15504 423 aaKnown RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SLC2A5P22732 501 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 FMO4P31512 558 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 GRAPQ13588 217 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PIGGQ5H8A4 983 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 SLC22A17Q8WUG5 538 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 C11orf24Q96F05 449 aaPredicted RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 NGRNQ9NPE2 291 aaKnown RBP4.9□□□□□ -1.62
VPS13D-213ENST00000613099 CPNE7Q9UBL6 633 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 DNPEPQ9ULA0 475 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 CDC14AQ9UNH5 594 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 U3KQV3 271 aa4.9□□□□□ -1.62
VPS13D-213ENST00000613099 PKD1L3Q7Z443 1732 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 A0A1W2PPL8 197 aa4.9□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF705EA8MWA4 302 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms