RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RCAN2Q14206 197 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 AP5B1Q2VPB7 878 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 BRMS1LQ5PSV4 323 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 MANEALQ5VSG8 457 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 PRMT9Q6P2P2 845 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 C16orf59Q7L2K0 433 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 GPSM1Q86YR5 675 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 RBM12BQ8IXT5 1001 aaKnown RBP20.17■□□□□ 0.82
SSBP3-216ENST00000610401 SLC22A17Q8WUG5 538 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 HERC2P3Q9BVR0 1158 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 FUNDC2Q9BWH2 189 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 TLR9Q9NR96 1032 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 FAM8A1Q9UBU6 413 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 BAG5Q9UL15 447 aa20.17■□□□□ 0.82
SSBP3-216ENST00000610401 RBM47A0AV96 593 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CBX4O00257 560 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CAPN15O75808 1086 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 RPP40O75818 363 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 C1QCP02747 245 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 DCKP27707 260 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 STC1P52823 247 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CDC42EP1Q00587 391 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 AQP6Q13520 282 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 SMYD5Q6GMV2 418 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 HACD2Q6Y1H2 254 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 GPRIN3Q6ZVF9 776 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 RBM23Q86U06 439 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 RSPH1Q8WYR4 309 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 ELMO1Q92556 727 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 GLMNQ92990 594 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 HACD3Q9P035 362 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 PADI3Q9ULW8 664 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 C5orf42Q9H799 3197 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 KRT87PA6NCN2 255 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 PRKD3O94806 890 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 LRATO95237 230 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CDH3P22223 829 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 HSPA7P48741 367 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 RPS24P62847 133 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 PRKG2Q13237 762 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 RGS21Q2M5E4 152 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 BROXQ5VW32 411 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 GDF6Q6KF10 455 aaPredicted RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 Q6ZSR9 355 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CLDN19Q8N6F1 224 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 FEM1AQ9BSK4 669 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 POLR1EQ9GZS1 481 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 NACA2Q9H009 215 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CCSER2Q9H7U1 834 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 INTS10Q9NVR2 710 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 AIG1Q9NVV5 245 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 TRIM17Q9Y577 477 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 A0A0G2JMZ2 1700 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 LRRC37A2A6NM11 1700 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CTPS1P17812 591 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 VBP1P61758 197 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 TWF1Q12792 350 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 KCNAB2Q13303 367 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 CTU2Q2VPK5 515 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 FAM174BQ3ZCQ3 159 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 PAGE2BQ5JRK9 111 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 C8orf59Q8N0T1 100 aaPredicted RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 LGI2Q8N0V4 545 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 EGFL8Q99944 293 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 RAD21L1Q9H4I0 556 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 MRM3Q9HC36 420 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 TRMT6Q9UJA5 497 aaKnown RBP20.16■□□□□ 0.82
SSBP3-216ENST00000610401 MED16Q9Y2X0 877 aa20.16■□□□□ 0.82
SSBP3-216ENST00000610401 SYCE1LA8MT33 242 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 MRPS6P82932 125 aaKnown RBP20.15■□□□□ 0.82
SSBP3-216ENST00000610401 ABRAXAS2Q15018 415 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 SETMARQ53H47 684 aaPredicted RBP20.15■□□□□ 0.82
SSBP3-216ENST00000610401 DET1Q7L5Y6 550 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 LZICQ8WZA0 190 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 SERPINB11Q96P15 392 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 TRIM54Q9BYV2 358 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 RASSF1Q9NS23 344 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 RGS17Q9UGC6 210 aaPredicted RBP20.15■□□□□ 0.82
SSBP3-216ENST00000610401 IGLV3-25P01717 112 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 SERPINF2P08697 491 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 IRF1P10914 325 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 MYCLP1P12525 358 aaPredicted RBP20.15■□□□□ 0.82
SSBP3-216ENST00000610401 HLCSP50747 726 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 BCAP31P51572 246 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 VAC14Q08AM6 782 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 MBOAT1Q6ZNC8 495 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 OSCP1Q8WVF1 389 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 TAMM41Q96BW9 452 aa20.15■□□□□ 0.82
SSBP3-216ENST00000610401 DEAF1O75398 565 aaPredicted RBP20.14■□□□□ 0.82
SSBP3-216ENST00000610401 HTR1BP28222 390 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 DAG1Q14118 895 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 FAM98BQ52LJ0 330 aaKnown RBP20.14■□□□□ 0.82
SSBP3-216ENST00000610401 MSANTD2Q6P1R3 559 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 FAM171BQ6P995 826 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 MDGA1Q8NFP4 955 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 FBXO32Q969P5 355 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 LRRC3Q9BY71 257 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 AMBRA1Q9C0C7 1298 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 SLC52A3Q9NQ40 469 aa20.14■□□□□ 0.82
SSBP3-216ENST00000610401 MARCH2Q9P0N8 246 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms