RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 NCK1P16333 377 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 HOXB6P17509 224 aaKnown RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 CDH5P33151 784 aaPredicted RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 C2orf80Q0P641 193 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 LRRC73Q5JTD7 316 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 PERM1Q5SV97 790 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 PAQR3Q6TCH7 311 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 RNF44Q7L0R7 432 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 KBTBD8Q8NFY9 601 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 HS3ST4Q9Y661 456 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 H0YGN5 161 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 J3KR12 359 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 NSG1P42857 185 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 CDK9P50750 372 aaKnown RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 RFTN1Q14699 578 aaPredicted RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 RGS21Q2M5E4 152 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 UBASH3BQ8TF42 649 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 NPY6RQ99463 290 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 XYLT2Q9H1B5 865 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 SMPD3Q9NY59 655 aaPredicted RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 PDP1Q9P0J1 537 aaPredicted RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 CNOT6Q9ULM6 557 aaKnown RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 Q9Y3F1 56 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 NFS1Q9Y697 457 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 NUP188Q5SRE5 1749 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 NBNO60934 754 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 FGBP02675 491 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 IL6P05231 212 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 GPIP06744 558 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 CSKP41240 450 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 NR1D2Q14995 579 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 PSRC1Q6PGN9 363 aaPredicted RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 ZNF671Q8TAW3 534 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 TFB2MQ9H5Q4 396 aaKnown RBP14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 C8orf4Q9NR00 106 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 ABCB8Q9NUT2 735 aa14.1□□□□□ -0.15
PCDHB16-201ENST00000609684 CCDC189A1A4V9 331 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 BMP7P18075 431 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 PAFAH1B3Q15102 231 aaKnown RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 TCEAL1Q15170 157 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SF1Q15637 639 aaKnown RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 CENPNQ96H22 339 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 EBPLQ9BY08 206 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SLITRK2Q9H156 845 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 RSPH9Q9H1X1 276 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 PNPLA8Q9NP80 782 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 RASSF1Q9NS23 344 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SLC2A6Q9UGQ3 507 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SLC7A8Q9UHI5 535 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 NIPSNAP2O75323 286 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SIX3O95343 332 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 RPS9P46781 194 aaKnown RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 C9orf64Q5T6V5 341 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 KREMEN2Q8NCW0 462 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 OR10A6Q8NH74 314 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 VANGL1Q8TAA9 524 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 MIR1-1HGQ9H1L0 117 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 CRISPLD1Q9H336 500 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 MFSD1Q9H3U5 465 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 CICQ96RK0 1608 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 RNASEH2AO75792 299 aaKnown RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 APODP05090 189 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 IGFBP5P24593 272 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 MED22Q15528 200 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SIRPB2Q5JXA9 342 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 ADGRF1Q5T601 910 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 PTCHD4Q6ZW05 846 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 REM2Q8IYK8 340 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 TEFMQ96QE5 360 aaKnown RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 TCF25Q9BQ70 676 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SMOC2Q9H3U7 446 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 ABCB10Q9NRK6 738 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SH3GLB1Q9Y371 365 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 ONECUT3O60422 494 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 NDUFS2O75306 463 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 RGS20O76081 388 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 MFN2O95140 757 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 SNAI1O95863 264 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 COL6A1P12109 1028 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 ACVRL1P37023 503 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 HERVK_113P63132 956 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 MED27Q6P2C8 311 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 ZC3HC1Q86WB0 502 aaKnown RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 COMMD2Q86X83 199 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 CPA6Q8N4T0 437 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 TEX47Q8TBZ9 253 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 CDKN2AIPNLQ96HQ2 116 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 ERVK-6Q9BXR3 956 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 PLGRKTQ9HBL7 147 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 ZNF624Q9P2J8 865 aaPredicted RBP14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 BTBD3Q9Y2F9 522 aa14.09□□□□□ -0.15
PCDHB16-201ENST00000609684 AHSGP02765 367 aa14.08□□□□□ -0.15
PCDHB16-201ENST00000609684 ASLP04424 464 aa14.08□□□□□ -0.15
PCDHB16-201ENST00000609684 THRBP10828 461 aa14.08□□□□□ -0.15
PCDHB16-201ENST00000609684 PTPN2P17706 415 aa14.08□□□□□ -0.15
PCDHB16-201ENST00000609684 IMPDH1P20839 514 aa14.08□□□□□ -0.15
PCDHB16-201ENST00000609684 CTSKP43235 329 aa14.08□□□□□ -0.15
PCDHB16-201ENST00000609684 AQP4P55087 323 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms