RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 TSGA13Q96PP4 275 aa16.98■□□□□ 0.31
CHMP4A-211ENST00000609024 NUDT9Q9BW91 350 aa16.98■□□□□ 0.31
CHMP4A-211ENST00000609024 HRASLS2Q9NWW9 162 aa16.98■□□□□ 0.31
CHMP4A-211ENST00000609024 DTLQ9NZJ0 730 aa16.98■□□□□ 0.31
CHMP4A-211ENST00000609024 ANAPC7Q9UJX3 599 aa16.98■□□□□ 0.31
CHMP4A-211ENST00000609024 KRT86O43790 486 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 ZBTB11O95625 1053 aaPredicted RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 ALPPP05187 535 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 RAB40ALP0C0E4 278 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 PIRTP0C851 137 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 ELAVL4P26378 380 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 SLC25A11Q02978 314 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 TMEM115Q12893 351 aaPredicted RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 GPS2Q13227 327 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 XRCC4Q13426 336 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 GPR19Q15760 415 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 LYPLAL1Q5VWZ2 237 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 NCBP2-AS2Q69YL0 99 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 AMZ2Q86W34 360 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 TICAM1Q8IUC6 712 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 RBMXL3Q8N7X1 1067 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 BRSK1Q8TDC3 778 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 TCTN2Q96GX1 697 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 SRPK1Q96SB4 655 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 ZCCHC2Q9C0B9 1178 aaKnown RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 ILKAPQ9H0C8 392 aaPredicted RBP16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 MAGEE1Q9HCI5 957 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 SEMA5BQ9P283 1151 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 TCFL5Q9UL49 500 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 ZNF711Q9Y462 761 aa16.97■□□□□ 0.31
CHMP4A-211ENST00000609024 ANKUB1A6NFN9 424 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 WIPF3A6NGB9 483 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 LRRC10BA6NIK2 292 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 MEN1O00255 615 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 DDX3XO00571 662 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 KLHL41O60662 606 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 CD48P09326 243 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 CDK18Q07002 472 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 RAPSNQ13702 412 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 PCSK7Q16549 785 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 CERS6Q6ZMG9 384 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 TMC3Q7Z5M5 1100 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 RAB43Q86YS6 212 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 ZNF547Q8IVP9 402 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 SLC34A3Q8N130 599 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 D2HGDHQ8N465 521 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 CISD2Q8N5K1 135 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 NIPA2Q8N8Q9 360 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 SNRNP40Q96DI7 357 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 C19orf60Q96EN9 201 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 NLNQ9BYT8 704 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 XPO4Q9C0E2 1151 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 IMP3Q9NV31 184 aaKnown RBP16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 ANO10Q9NW15 660 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 C5AR2Q9P296 337 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 NFKBIL1Q9UBC1 381 aaPredicted RBP16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 PSMD13Q9UNM6 376 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 SRPK3Q9UPE1 567 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 WDR37Q9Y2I8 494 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 PADI2Q9Y2J8 665 aa16.96■□□□□ 0.31
CHMP4A-211ENST00000609024 OR5K3A6NET4 321 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 F5H423 210 aaPredicted RBP16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 MYO1FO00160 1098 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 CBX6O95503 412 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 TNNT3P45378 269 aaPredicted RBP16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 ITGA1P56199 1179 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 PRKAA1Q13131 559 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 DPYSL3Q14195 570 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 KRT33BQ14525 404 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 PDK2Q15119 407 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 RPE65Q16518 533 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 GPR150Q8NGU9 434 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 LRRN4Q8WUT4 740 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 TM9SF4Q92544 642 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 EID2BQ96D98 161 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 HDAC11Q96DB2 347 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 BTBD6Q96KE9 485 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 LRFN5Q96NI6 719 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 VPS35Q96QK1 796 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 ZNF670Q9BS34 389 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 CBX8Q9HC52 389 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 ASF1BQ9NVP2 202 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 B3GNT3Q9Y2A9 372 aa16.95■□□□□ 0.3
CHMP4A-211ENST00000609024 CELSR2Q9HCU4 2923 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 MED13Q9UHV7 2174 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 C9J4A7 227 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 KCNK1O00180 336 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 POP7O75817 140 aaKnown RBP16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 MMP2P08253 660 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 BPIP17213 487 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 CYP2A7P20853 494 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 AGXTP21549 392 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 PER3P56645 1201 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 FILIP1LQ4L180 1135 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 VWA5B1Q5TIE3 1220 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 NT5DC3Q86UY8 548 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 DSELQ8IZU8 1212 aa16.94■□□□□ 0.3
CHMP4A-211ENST00000609024 CARFQ8N187 725 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms