RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 UNC50Q53HI1 259 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 PHYKPLQ8IUZ5 450 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 MKRN2Q9H000 416 aaKnown RBP21.26■□□□□ 0.99
USP6NL-204ENST00000606752 GSTO2Q9H4Y5 243 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 DNAJC28Q9NX36 388 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 ZDHHC2Q9UIJ5 367 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 CNOT6Q9ULM6 557 aaKnown RBP21.26■□□□□ 0.99
USP6NL-204ENST00000606752 A0A1W2PP55 124 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 A0A1W2PQF6 199 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 SLCO1B7G3V0H7 640 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 KPNA5O15131 536 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 SGTAO43765 313 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 UBOX5O94941 541 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 SERPINB3P29508 390 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 GPR1P46091 355 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 ZBTB16Q05516 673 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 TMEM115Q12893 351 aaPredicted RBP21.25■□□□□ 0.99
USP6NL-204ENST00000606752 TGFBIQ15582 683 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 IER5LQ5T953 404 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 CYHR1Q6ZMK1 362 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 MAVSQ7Z434 540 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 PELI3Q8N2H9 469 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 PPM1EQ8WY54 764 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 ERP27Q96DN0 273 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 MSANTD3Q96H12 275 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 CDX2Q99626 313 aaPredicted RBP21.25■□□□□ 0.99
USP6NL-204ENST00000606752 MYLK2Q9H1R3 596 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 STX16-NPEPL1H3BU86 382 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 MATN2O00339 956 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 STX16O14662 325 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 INPP4BO15327 924 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 RNASEH2AO75792 299 aaKnown RBP21.25■□□□□ 0.99
USP6NL-204ENST00000606752 FTH1P02794 183 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 ENO3P13929 434 aaPredicted RBP21.25■□□□□ 0.99
USP6NL-204ENST00000606752 HK3P52790 923 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 ZNF648Q5T619 568 aaPredicted RBP21.25■□□□□ 0.99
USP6NL-204ENST00000606752 RAET1GQ6H3X3 334 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 AGR3Q8TD06 166 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 SKA1Q96BD8 255 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 RILPQ96NA2 401 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 EBF4Q9BQW3 602 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 FAM126AQ9BYI3 521 aaPredicted RBP21.25■□□□□ 0.99
USP6NL-204ENST00000606752 SHCBP1LQ9BZQ2 653 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 CD274Q9NZQ7 290 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 VTI1BQ9UEU0 232 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 SERGEFQ9UGK8 458 aa21.25■□□□□ 0.99
USP6NL-204ENST00000606752 PIKFYVEQ9Y2I7 2098 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 COL4A2P08572 1712 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 K7ESM1 405 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 HDAC3O15379 428 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 NARSO43776 548 aaKnown RBP21.24■□□□□ 0.99
USP6NL-204ENST00000606752 TM7SF2O76062 418 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 PCDH8O95206 1070 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 SIX3O95343 332 aaPredicted RBP21.24■□□□□ 0.99
USP6NL-204ENST00000606752 IDH3AP50213 366 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 ALDH18A1P54886 795 aaKnown RBP21.24■□□□□ 0.99
USP6NL-204ENST00000606752 GBX1Q14549 363 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 PLEKHS1Q5SXH7 462 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 SBSNQ6UWP8 590 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 FRA10AC1Q70Z53 315 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 RPS27LQ71UM5 84 aaKnown RBP21.24■□□□□ 0.99
USP6NL-204ENST00000606752 TMPRSS6Q8IU80 811 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 RASGEF1AQ8N9B8 481 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 COG4Q9H9E3 785 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 NUDT4Q9NZJ9 180 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 TSR3Q9UJK0 312 aaKnown RBP21.24■□□□□ 0.99
USP6NL-204ENST00000606752 ZFP69BQ9UJL9 534 aa21.24■□□□□ 0.99
USP6NL-204ENST00000606752 ATG2BQ96BY7 2078 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 IGLON5A6NGN9 336 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 SNX2O60749 519 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 DNTTP04053 509 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 NAA20P61599 178 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 FBXO43Q4G163 708 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 SEL1L3Q68CR1 1132 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 ASB2Q96Q27 587 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 C1QTNF3Q9BXJ4 246 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 EPHX3Q9H6B9 360 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 FBXL12Q9NXK8 326 aa21.23■□□□□ 0.99
USP6NL-204ENST00000606752 APOBEC2Q9Y235 224 aaKnown RBP21.23■□□□□ 0.99
USP6NL-204ENST00000606752 NCF1BA6NI72 391 aaPredicted RBP21.22■□□□□ 0.99
USP6NL-204ENST00000606752 OR2AG2A6NM03 316 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 NCF1CA8MVU1 366 aaPredicted RBP21.22■□□□□ 0.99
USP6NL-204ENST00000606752 ANKRD65E5RJM6 399 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 NCF1P14598 390 aaPredicted RBP21.22■□□□□ 0.99
USP6NL-204ENST00000606752 COL9A1P20849 921 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 EEF1DP29692 281 aaKnown RBP21.22■□□□□ 0.99
USP6NL-204ENST00000606752 HSPA14Q0VDF9 509 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 BNIP1Q12981 228 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 PPP1R3AQ16821 1122 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 SPRED3Q2MJR0 410 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 SPDYAQ5MJ70 313 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 SH2D4BQ5SQS7 431 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 EPGNQ6UW88 154 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 CLNKQ7Z7G1 428 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 KIRREL3Q8IZU9 778 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 GANCQ8TET4 914 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 FAM3CQ92520 227 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 FAM131CQ96AQ9 280 aa21.22■□□□□ 0.99
USP6NL-204ENST00000606752 ZCCHC2Q9C0B9 1178 aaKnown RBP21.22■□□□□ 0.99
USP6NL-204ENST00000606752 CD248Q9HCU0 757 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms