RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PCSK9Q8NBP7 692 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 NPLQ9BXD5 320 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 ACTL8Q9H568 366 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 GKN1Q9NS71 199 aa19.97■□□□□ 0.79
SHKBP1-225ENST00000600733 CLDN11O75508 207 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 CNPP09543 421 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 C7P10643 843 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 UMPSP11172 480 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 RANBP1P43487 201 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 SLC11A1P49279 550 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 CLCN7P51798 805 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 DGKQP52824 942 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 NAA20P61599 178 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 CAP1Q01518 475 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 PLCL1Q15111 1095 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 OTUD3Q5T2D3 398 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 FUT10Q6P4F1 479 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 ABRAXAS1Q6UWZ7 409 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 DLEU7Q6UYE1 221 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 HID1Q8IV36 788 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 TTC30BQ8N4P2 665 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 ADAMTS16Q8TE57 1224 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 ADGRE3Q9BY15 652 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 CD320Q9NPF0 282 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 PFDN4Q9NQP4 134 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 GALNT8Q9NY28 637 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 TMX2-CTNND1H3BSU7 103 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 PFDN6O15212 129 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 SNAP91O60641 907 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 KATNA1O75449 491 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 PRAMEF12O95522 483 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 CST5P28325 142 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 YAP1P46937 504 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 STT3AP46977 705 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 ACLYP53396 1101 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 ARF5P84085 180 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 ZNF177Q13360 481 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 PMS2P3Q13401 168 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 RNF219Q5W0B1 726 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 GLYATQ6IB77 296 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 RGMBQ6NW40 437 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 CHST15Q7LFX5 561 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 PATL1Q86TB9 770 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 GPR180Q86V85 440 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 C12orf43Q96C57 262 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 DCUN1D5Q9BTE7 237 aa19.96■□□□□ 0.79
SHKBP1-225ENST00000600733 KANSL1LA0AUZ9 987 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 ILVBLA1L0T0 632 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 ADAM12O43184 909 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 TBC1D4O60343 1298 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 RSL1D1O76021 490 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 CORO1AP31146 461 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 GALK1P51570 392 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 CLCN4P51793 760 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 TWF1Q12792 350 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 MTA1Q13330 715 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 NR6A1Q15406 480 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 FXNQ16595 210 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 TMEM214Q6NUQ4 689 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 FRA10AC1Q70Z53 315 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 GOLGA7Q7Z5G4 137 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 DTWD1Q8N5C7 304 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 NSMCE2Q96MF7 247 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 C8orf4Q9NR00 106 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 TMEM161AQ9NX61 479 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 A0A0J9YVX5 310 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 OR7A17O14581 309 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 COCHO43405 550 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 CD160O95971 181 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 ALDH2P05091 517 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 IRF1P10914 325 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 CD9P21926 228 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 CYP20A1Q6UW02 462 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 PROSER1Q86XN7 944 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 DPP10Q8N608 796 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 OR4F6Q8NGB9 312 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 OSCP1Q8WVF1 389 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 EID2BQ96D98 161 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 ZIC5Q96T25 663 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 HEBP1Q9NRV9 189 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 ZNF639Q9UID6 485 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 POLR3HQ9Y535 204 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 ST14Q9Y5Y6 855 aa19.95■□□□□ 0.78
SHKBP1-225ENST00000600733 SCAMP3O14828 347 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 LSM1O15116 133 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 ESR1P03372 595 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 PTGER3P43115 390 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 ABRAXAS2Q15018 415 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 RFTN2Q52LD8 501 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 SAPCD2Q86UD0 394 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 LRRC43Q8N309 656 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 BPIFB1Q8TDL5 484 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 WBP2Q969T9 261 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 CXorf21Q9HAI6 301 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 NTN4Q9HB63 628 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 NUDT4Q9NZJ9 180 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 COMMD10Q9Y6G5 202 aa19.94■□□□□ 0.78
SHKBP1-225ENST00000600733 PCNAP12004 261 aa19.93■□□□□ 0.78
SHKBP1-225ENST00000600733 AP5B1Q2VPB7 878 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms