RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ATG14Q6ZNE5 492 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 YTHDF3Q7Z739 585 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 GPSM1Q86YR5 675 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 RPLP0P6Q8NHW5 317 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 SIPA1Q96FS4 1042 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 ILKAPQ9H0C8 392 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 EPHX3Q9H6B9 360 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 KCNK13Q9HB14 408 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 KCNK4Q9NYG8 393 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 UBXN8O00124 270 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 SGTAO43765 313 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 FSBPO95073 299 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 ENO3P13929 434 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 MLF2Q15773 248 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 ARL13AQ5H913 290 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 PLEKHS1Q5SXH7 462 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 ADAMTSL2Q86TH1 951 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 RASGEF1AQ8N9B8 481 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 EXT2Q93063 718 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 TMEM237Q96Q45 408 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 ZCCHC2Q9C0B9 1178 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 MBD1Q9UIS9 605 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 MMP17Q9ULZ9 603 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 RAP2CQ9Y3L5 183 aa17.39■□□□□ 0.37
SHKBP1-224ENST00000600718 CCT8L1PA6NM43 557 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 SUPT3HB4E1H0 165 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 PLRG1O43660 514 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 SUPT3HO75486 399 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 KITP10721 976 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 GFAPP14136 432 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 IL9P15248 144 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 HERVK_113P63132 956 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 ZNF648Q5T619 568 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 CYHR1Q6ZMK1 362 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 USP30Q70CQ3 517 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 PELI3Q8N2H9 469 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 PTGR2Q8N8N7 351 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 ERVK-6Q9BXR3 956 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 SLC6A17Q9H1V8 727 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 TRIM39Q9HCM9 518 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 HAO1Q9UJM8 370 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 FZD4Q9ULV1 537 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 DUSP12Q9UNI6 340 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 NCKAP1Q9Y2A7 1128 aa17.38■□□□□ 0.37
SHKBP1-224ENST00000600718 A0A0G2JND7 137 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 K7ESM1 405 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 KLK8O60259 260 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 KIAA0754O94854 1291 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 CD72P21854 359 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 HK2P52789 917 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 RPS21P63220 83 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 PRKAA1Q13131 559 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 GBX1Q14549 363 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 PFKFB4Q16877 469 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 ZNF678Q5SXM1 525 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 KIAA1161Q6NSJ0 714 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 ADAMTSL4Q6UY14 1074 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 ZNF852Q6ZMS4 543 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 KBTBD6Q86V97 674 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 LSMEM2Q8N112 164 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 FBXO39Q8N4B4 442 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 OR14C36Q8NHC7 312 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 MOCOSQ96EN8 888 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 TRMOQ9BU70 441 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 TMEM120AQ9BXJ8 343 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 FAM126AQ9BYI3 521 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 EML4Q9HC35 981 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 PNPOQ9NVS9 261 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 MARCOQ9UEW3 520 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 ATG13O75143 517 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 NAA20P61599 178 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 GALNT1Q10472 559 aaPredicted RBP17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 PNCKQ6P2M8 343 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 TRPM8Q7Z2W7 1104 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 HIC2Q96JB3 615 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 MRGPRX1Q96LB2 322 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 CCM2Q9BSQ5 444 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 ACSS2Q9NR19 701 aa17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 NDRG2Q9UN36 371 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-224ENST00000600718 OR2AG2A6NM03 316 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 STX16-NPEPL1H3BU86 382 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 STX16O14662 325 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 VEGFDO43915 354 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 NUAK1O60285 661 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 DCTN3O75935 186 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 CDK14O94921 469 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 CHRNGP07510 517 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 ACADMP11310 421 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 PRLHRP49683 370 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 MNAT1P51948 309 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 PRKCQQ04759 706 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 WSCD2Q2TBF2 565 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 FBXW10Q5XX13 1052 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 SEL1L3Q68CR1 1132 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 NEK5Q6P3R8 708 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 TMEM220Q6QAJ8 160 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 TMEM92Q6UXU6 159 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 FRA10AC1Q70Z53 315 aa17.36■□□□□ 0.37
SHKBP1-224ENST00000600718 ADGRG6Q86SQ4 1221 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms