RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 AARS2Q5JTZ9 985 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 UBAP2Q5T6F2 1119 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 MRNIPQ6NTE8 343 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 WDR93Q6P2C0 686 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 PACS1Q6VY07 963 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CAPN12Q6ZSI9 719 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 TMPRSS7Q7RTY8 843 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CILP2Q8IUL8 1156 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF547Q8IVP9 402 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 DENND6AQ8IWF6 608 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CNTN4Q8IWV2 1026 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 LMNTD2Q8IXW0 634 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 NAT14Q8WUY8 206 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 FAM167BQ9BTA0 163 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 TXLNGYQ9BZA5 131 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 ZCCHC2Q9C0B9 1178 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CDC42EP4Q9H3Q1 356 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 CARS2Q9HA77 564 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 IARS2Q9NSE4 1012 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 MOSPD1Q9UJG1 213 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 PCOLCE2Q9UKZ9 415 aa18.58■□□□□ 0.56
CCDC9-205ENST00000600117 TDRD6O60522 2096 aaKnown RBP18.58■□□□□ 0.56
CCDC9-205ENST00000600117 SCAMP1O15126 338 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 GRID2O43424 1007 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 OR1I1O60431 355 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 PIAS2O75928 621 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 TNFP01375 233 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 F7P08709 466 aaPredicted RBP18.57■□□□□ 0.56
CCDC9-205ENST00000600117 SLC1A2P43004 574 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 GNPDA1P46926 289 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 TTPAP49638 278 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 HNRNPKP61978 463 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC9-205ENST00000600117 C19orf57Q0VDD7 668 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 KYNUQ16719 465 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF470Q6ECI4 717 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 KANSL1Q7Z3B3 1105 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 RD3Q7Z3Z2 195 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 OTUD6BQ8N6M0 293 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 CALML6Q8TD86 181 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 OR2M4Q96R27 311 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 TCF12Q99081 682 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 LRRC61Q9BV99 259 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 SLC17A6Q9P2U8 582 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 APOBEC3BQ9UH17 382 aaKnown RBP18.57■□□□□ 0.56
CCDC9-205ENST00000600117 PRKAB1Q9Y478 270 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 PRSS21Q9Y6M0 314 aa18.57■□□□□ 0.56
CCDC9-205ENST00000600117 ATMQ13315 3056 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 PTPRQQ9UMZ3 2332 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 A0A087WV48 116 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TCRBV9S1A1TA0A576 114 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 CFAP99D6REC4 459 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 S1PR4O95977 384 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 RALBP11234 206 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 ATP1B2P14415 290 aaPredicted RBP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 EPHA8P29322 1005 aaPredicted RBP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 NSG1P42857 185 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 ARRB1P49407 418 aaPredicted RBP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 BLKP51451 505 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 MGAT5Q09328 741 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 BNIP3Q12983 259 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 CTBP1Q13363 440 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 GTF2H3Q13889 308 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF789Q5FWF6 425 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TEDDM1Q5T9Z0 273 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TMEM220Q6QAJ8 160 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 C3orf62Q6ZUJ4 267 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 CYS1Q717R9 158 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 DET1Q7L5Y6 550 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 C11orf96Q7Z7L8 435 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 SDCCAG8Q86SQ7 713 aaPredicted RBP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 LRRTM4Q86VH4 590 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 GALNT13Q8IUC8 556 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 CLDN19Q8N6F1 224 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 SCG3Q8WXD2 468 aaKnown RBP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 LPGAT1Q92604 370 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 SGF29Q96ES7 293 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 DCUN1D1Q96GG9 259 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TTC25Q96NG3 672 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 UBL7Q96S82 380 aaPredicted RBP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TTC1Q99614 292 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 SLC13A1Q9BZW2 595 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TMEM168Q9H0V1 697 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 P2RY12Q9H244 342 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 SMYD2Q9NRG4 433 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TM7SF3Q9NS93 570 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 TRNAU1APQ9NX07 287 aaKnown RBP18.56■□□□□ 0.56
CCDC9-205ENST00000600117 FBXO5Q9UKT4 447 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 PLEKHM1Q9Y4G2 1056 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 ST14Q9Y5Y6 855 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 MGAQ8IWI9 3026 aa18.56■□□□□ 0.56
CCDC9-205ENST00000600117 OR2AG2A6NM03 316 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 H3BM21 787 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 YKT6O15498 198 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 SDC3O75056 442 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 NDUFS3O75489 264 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 CELA2BP08218 269 aaPredicted RBP18.55■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF883P0CG24 379 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 PPARGP37231 505 aaPredicted RBP18.55■□□□□ 0.56
CCDC9-205ENST00000600117 CCT8P50990 548 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms