RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 PDP2Q9P2J9 529 aa7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 CRLS1Q9UJA2 301 aa7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 ACSL6Q9UKU0 697 aa7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 LHX6Q9UPM6 363 aa7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 DRG1Q9Y295 367 aaKnown RBP7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 PCDHGA7Q9Y5G6 932 aa7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 DNMT3AQ9Y6K1 912 aaPredicted RBP7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 FREM2Q5SZK8 3169 aa7.84□□□□□ -1.15
CHMP2A-205ENST00000600006 PIKFYVEQ9Y2I7 2098 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 MN1Q10571 1320 aaPredicted RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 KLHL33A6NCF5 533 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 CCDC188H7C350 402 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 POP7O75817 140 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 VIPP01282 170 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 JMJD7P0C870 316 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 ZSCAN5DPP0CG00 497 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 HOXB3P14651 431 aaPredicted RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 ETS1P14921 441 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 TPH1P17752 444 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 ITIH1P19827 911 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 MSH3P20585 1137 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 ITPKBP27987 946 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 RPL22P35268 128 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 ETV5P41161 510 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 GRIA1P42261 906 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 HALP42357 657 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 FNTAP49354 379 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 PRLHRP49683 370 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 DRG2P55039 364 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 TLE3Q04726 772 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 CKAP4Q07065 602 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 SEPT6Q14141 434 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 NFE2L1Q14494 772 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 SEPT7Q16181 437 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 CYP1B1Q16678 543 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 FNBP1LQ5T0N5 605 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 FOXR1Q6PIV2 292 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 TMEM220Q6QAJ8 160 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 WDR74Q6RFH5 385 aaPredicted RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 C19orf48Q6RUI8 117 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 C4orf22Q6V702 233 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 LRRC69Q6ZNQ3 347 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 FAM83HQ6ZRV2 1179 aaPredicted RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 TMEM26Q6ZUK4 368 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 MICALCLQ6ZW33 695 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 DET1Q7L5Y6 550 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 SPACA3Q8IXA5 215 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 RBM12BQ8IXT5 1001 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 BEND7Q8N7W2 519 aaPredicted RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 PRELID2Q8N945 189 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 DNAAF3Q8N9W5 541 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 KIF18AQ8NI77 898 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 GRK7Q8WTQ7 553 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 HEXDCQ8WVB3 486 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 HNRNPLLQ8WVV9 542 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 PEX13Q92968 403 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 CDKN2AIPNLQ96HQ2 116 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 RANBP9Q96S59 729 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 COPS8Q99627 209 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 TBC1D10AQ9BXI6 508 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 B3GNT4Q9C0J1 378 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 FAM96AQ9H5X1 160 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 CASS4Q9NQ75 786 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 PIH1D1Q9NWS0 290 aaKnown RBP7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 ZDHHC3Q9NYG2 299 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 TMEM9Q9P0T7 183 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 PISDQ9UG56 409 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 RIMKLBQ9ULI2 386 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 WDR37Q9Y2I8 494 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 SLC30A1Q9Y6M5 507 aa7.83□□□□□ -1.16
CHMP2A-205ENST00000600006 DMXL2Q8TDJ6 3036 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 HEATR9A2RTY3 570 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 MGAT4DA6NG13 374 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 OR52A4PA6NMU1 304 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 CFAP99D6REC4 459 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 E7EVH7 732 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 FANCGO15287 622 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 NVLO15381 856 aaKnown RBP7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 PHF2O75151 1096 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 GAS8O95995 478 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 APRTP07741 180 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 ANKRD34CP0C6C1 535 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 PRSS56P0CW18 603 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 RALBP11234 206 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 ACRV1P26436 265 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 RPL10P27635 214 aaKnown RBP7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 SLC5A2P31639 672 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 FOXN2P32314 431 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 DEKP35659 375 aaKnown RBP7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 LMAN1P49257 510 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 CDKN1CP49918 316 aaPredicted RBP7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 ARSDP51689 593 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 ACVR1Q04771 509 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 CACNG1Q06432 222 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 LAMB3Q13751 1172 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 ITIH4Q14624 930 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 CLCA4Q14CN2 919 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 WHAMMP3Q1A5X7 153 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 SKIDA1Q1XH10 827 aa7.82□□□□□ -1.16
CHMP2A-205ENST00000600006 ZNF658BQ4V348 819 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms