RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 MSRB2Q9Y3D2 182 aa19.16■□□□□ 0.66
SHKBP1-221ENST00000599833 TRBV23OR9-2A0A075B6M9 112 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 PRAMEF33A0A0G2JMD5 474 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 FAM237BA0A1B0GVD1 139 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 MGAT4DA6NG13 374 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 SDR42E2A6NKP2 422 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 OR1I1O60431 355 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 KCNJ13O60928 360 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 BANF1O75531 89 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 CAPNS1P04632 268 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 RPL21P46778 160 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 CCL7P80098 99 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 SARNPP82979 210 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 CBLBQ13191 982 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 CLCA4Q14CN2 919 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 METRNLQ641Q3 311 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 TAS2R42Q7RTR8 314 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 LDB1Q86U70 411 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 AMZ2Q86W34 360 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 IGDCC3Q8IVU1 814 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 MAPK15Q8TD08 544 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 HEXDCQ8WVB3 486 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 TTC25Q96NG3 672 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 EVA1BQ9NVM1 165 aa19.15■□□□□ 0.66
SHKBP1-221ENST00000599833 A0A1W2PNU3 283 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 SNX2O60749 519 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 MT-CO3P00414 261 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 XRCC1P18887 633 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 SLC19A1P41440 591 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 DRG2P55039 364 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 PRAMEP78395 509 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 CFHR1Q03591 330 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 DHX9Q08211 1270 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 MORF4L2Q15014 288 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 ANKRD20A4Q4UJ75 823 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 PCGF5Q86SE9 256 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 GALNT15Q8N3T1 639 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 OR6P1Q8NGX9 317 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 P2RY12Q9H244 342 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 OSGEPL1Q9H4B0 414 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 SARS2Q9NP81 518 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 CATSPERZQ9NTU4 200 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 MRFAP1Q9Y605 127 aa19.14■□□□□ 0.65
SHKBP1-221ENST00000599833 KIR2DS5A0A0G2JLQ3 304 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 A0A0G2JNG1 304 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 C17orf113A0A1B0GUU1 675 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 FAM187AA6NFU0 413 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 BHMG1C9JSJ3 638 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 KIR2DS3K7RE56 304 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 CD3EAPO15446 510 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 RPL10P27635 214 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 NSG1P42857 185 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 ITGA8P53708 1063 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 OR1D5P58170 312 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 TARDBPQ13148 414 aaKnown RBP eCLIP19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 KIR2DS5Q14953 304 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 SEPT7Q16181 437 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 TYSND1Q2T9J0 566 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 DUPD1Q68J44 220 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 CERS6Q6ZMG9 384 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 CCNJLQ8IV13 435 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 GPR150Q8NGU9 434 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 DCUN1D1Q96GG9 259 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 LRRN3Q9H3W5 708 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 GRHL1Q9NZI5 618 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 IL1RAPL1Q9NZN1 696 aa19.13■□□□□ 0.65
SHKBP1-221ENST00000599833 MAP1BP46821 2468 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 MAGEB16A2A368 324 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 OR52A4PA6NMU1 304 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 CFAP99D6REC4 459 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 GOLGA8KD6RF30 607 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 GOLGA8TH3BQL2 631 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 AP2A2O94973 939 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 VAPBO95292 243 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 RPLP0P05388 317 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 RALBP11234 206 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 IDSP22304 550 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 PBLDP30039 288 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 HM13Q8TCT9 377 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 LKAAEAR1Q8TD35 194 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 SNF8Q96H20 258 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 ERP44Q9BS26 406 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 CPNE7Q9UBL6 633 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 CLCA2Q9UQC9 943 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 SNX24Q9Y343 169 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 PCDHB1Q9Y5F3 818 aa19.12■□□□□ 0.65
SHKBP1-221ENST00000599833 IGHV1OR21-1A0A087WYE8 117 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 OR5K4A6NMS3 321 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 TCEA3O75764 348 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 URI1O94763 535 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 USP1O94782 785 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 CD1CP29017 333 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 CSF2RBP32927 897 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 GPR3P46089 330 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 HHEXQ03014 270 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 SQSTM1Q13501 440 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 FASTKD1Q53R41 847 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 LYPLAL1Q5VWZ2 237 aa19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 CAPRIN2Q6IMN6 1127 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-221ENST00000599833 ZNF574Q6ZN55 896 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms