RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 EFHD1Q9BUP0 239 aa18.41■□□□□ 0.54
PNKP-213ENST00000599543 FSD1LQ9BXM9 530 aa18.41■□□□□ 0.54
PNKP-213ENST00000599543 TRIT1Q9H3H1 467 aaKnown RBP18.41■□□□□ 0.54
PNKP-213ENST00000599543 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.41■□□□□ 0.54
PNKP-213ENST00000599543 OGFRQ9NZT2 677 aa18.41■□□□□ 0.54
PNKP-213ENST00000599543 TMPRSS11EQ9UL52 423 aa18.41■□□□□ 0.54
PNKP-213ENST00000599543 PRR19A6NJB7 356 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 OR52A4PA6NMU1 304 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 H7C0C1 242 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 TOX3O15405 576 aaPredicted RBP18.4■□□□□ 0.54
PNKP-213ENST00000599543 RASSF9O75901 435 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 ITGB6P18564 788 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 HLA-DPA1P20036 260 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 CHRNA4P43681 627 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 ATP5OP48047 213 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 FOXM1Q08050 763 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 MPP3Q13368 585 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 RPS6KA1Q15418 735 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 SLC1A5Q15758 541 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 AGAP9Q5VTM2 703 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 ABRAXAS1Q6UWZ7 409 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 FAM151BQ6UXP7 276 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 WASH2PQ6VEQ5 465 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 RBM12BQ8IXT5 1001 aaKnown RBP18.4■□□□□ 0.54
PNKP-213ENST00000599543 ZNF567Q8N184 647 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 ACTL9Q8TC94 416 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 OXNAD1Q96HP4 312 aaPredicted RBP18.4■□□□□ 0.54
PNKP-213ENST00000599543 SLC45A3Q96JT2 553 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 MRGPRX2Q96LB1 330 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 CATSPER2Q96P56 530 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 FCRL5Q96RD9 977 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 SPRY4Q9C004 299 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 IL26Q9NPH9 171 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 WASH6PQ9NQA3 447 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 GEMIN8Q9NWZ8 242 aaKnown RBP18.4■□□□□ 0.54
PNKP-213ENST00000599543 RSPH14Q9UHP6 348 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 R3HDM2Q9Y2K5 976 aaKnown RBP18.4■□□□□ 0.54
PNKP-213ENST00000599543 PKP3Q9Y446 797 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 TMEM184BQ9Y519 407 aaPredicted RBP18.4■□□□□ 0.54
PNKP-213ENST00000599543 SLC30A1Q9Y6M5 507 aa18.4■□□□□ 0.54
PNKP-213ENST00000599543 GLYATL1P3A0A0U1RQE8 302 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 HACD1B0YJ81 288 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 APOC4-APOC2K7ER74 178 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 APOC2P02655 101 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 BRAFP15056 766 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 PTPN7P35236 360 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 CETN2P41208 172 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 HALP42357 657 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 CAPZBP47756 277 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 NFKB2Q00653 900 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 GPR18Q14330 331 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 LDLRAP1Q5SW96 308 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 C11orf96Q7Z7L8 435 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 UNC5BQ8IZJ1 945 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 TTC30BQ8N4P2 665 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 DTX3LQ8TDB6 740 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 ULBP3Q9BZM4 244 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 SLC25A18Q9H1K4 315 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 ADNPQ9H2P0 1102 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 CLMPQ9H6B4 373 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 SLC40A1Q9NP59 571 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 SIDT1Q9NXL6 827 aaKnown RBP18.39■□□□□ 0.53
PNKP-213ENST00000599543 TRHDEQ9UKU6 1024 aa18.39■□□□□ 0.53
PNKP-213ENST00000599543 LOC101059948A0A1B0GTJ6 334 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 RBL1P28749 1068 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 CXCR5P32302 372 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 CCR10P46092 362 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 SEPHS1P49903 392 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 POLE2P56282 527 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 EIF3EP60228 445 aaKnown RBP18.38■□□□□ 0.53
PNKP-213ENST00000599543 ABHD18Q0P651 414 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 ITGA9Q13797 1035 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 CHRNA6Q15825 494 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 ATG14Q6ZNE5 492 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 TIPARPQ7Z3E1 657 aaKnown RBP18.38■□□□□ 0.53
PNKP-213ENST00000599543 AMZ2Q86W34 360 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 ESX1Q8N693 406 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 RSC1A1Q92681 617 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 TLR10Q9BXR5 811 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 TRIM4Q9C037 500 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 ZNF768Q9H5H4 540 aaKnown RBP18.38■□□□□ 0.53
PNKP-213ENST00000599543 IL17CQ9P0M4 197 aa18.38■□□□□ 0.53
PNKP-213ENST00000599543 GPR39O43194 453 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 ZSCAN12O43309 604 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 BUD23O43709 281 aaKnown RBP18.37■□□□□ 0.53
PNKP-213ENST00000599543 KCNJ13O60928 360 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 TJP3O95049 919 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 WISP1O95388 367 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 DLGAP3O95886 979 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 PRKAR1AP10644 381 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 LEPRP48357 1165 aaKnown RBP18.37■□□□□ 0.53
PNKP-213ENST00000599543 KCNC4Q03721 635 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 KCNAB2Q13303 367 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 SEL1L2Q5TEA6 688 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 IRGCQ6NXR0 463 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 SLC35F6Q8N357 371 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
PNKP-213ENST00000599543 DDHD1Q8NEL9 900 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 TRIM58Q8NG06 486 aa18.37■□□□□ 0.53
PNKP-213ENST00000599543 ATG4AQ8WYN0 398 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms