RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.35□□□□□ -0.756e-9■■■□□ 15.8
CHMP2A-202ENST00000596708 SNRNP200O75643 2136 aaKnown RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UBA6A0AVT1 1052 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 SYCE3A1L190 88 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 CLEC18AA5D8T8 446 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 C3orf70A6NLC5 250 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 OR2AG2A6NM03 316 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 ZNF487B1APH4 448 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 C21orf140B9A014 251 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 AKR1B10O60218 316 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UGT1A9O60656 530 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 VPS4BO75351 444 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 DNAJB5O75953 348 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 RECKO95980 971 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 TMEM253P0C7T8 217 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 EBLN1P0CF75 366 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 FOLR1P15328 257 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UGT1A6P19224 532 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UGT1A1P22309 533 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UGT1A4P22310 534 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 FECHP22830 423 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 PTPN3P26045 913 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 PBLDP30039 288 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 HMGCLP35914 325 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 SPAM1P38567 509 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 ARHGAP25P42331 645 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 CD97P48960 835 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 PMS2P54278 862 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 PDE1BQ01064 536 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 XRCC4Q13426 336 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 SEMA5AQ13591 1074 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 NOMO1Q15155 1222 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 CHRNA6Q15825 494 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 RPE65Q16518 533 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 DNTTIP2Q5QJE6 756 aaKnown RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 ZDHHC20Q5W0Z9 365 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 PWWP2BQ6NUJ5 590 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 FAM199XQ6PEV8 388 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 CLEC18BQ6UXF7 455 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 FAM151BQ6UXP7 276 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 BZW1Q7L1Q6 419 aaKnown RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 BPHLQ86WA6 291 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 VSIG1Q86XK7 387 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 APLFQ8IW19 511 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 EFCAB3Q8N7B9 438 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 CLEC18CQ8NCF0 446 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 GPR150Q8NGU9 434 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 SEC14L1Q92503 715 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 TADA1Q96BN2 335 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 SLC41A2Q96JW4 573 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 TEKT5Q96M29 485 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 OLFM3Q96PB7 478 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 FCRL4Q96PJ5 515 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 ANP32EQ9BTT0 268 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 ZCCHC2Q9C0B9 1178 aaKnown RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 TRABDQ9H4I3 376 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 ACTL8Q9H568 366 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 AKIRIN1Q9H9L7 192 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UGT1A7Q9HAW7 530 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UGT1A10Q9HAW8 530 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UGT1A8Q9HAW9 530 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 IL26Q9NPH9 171 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 FAM153AQ9UHL3 310 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 VPS4AQ9UN37 437 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 CFAP20Q9Y6A4 193 aaKnown RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 DNMT3AQ9Y6K1 912 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 RELNP78509 3460 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 UBR5O95071 2799 aaPredicted RBP10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 FER1L5A0AVI2 2057 aa10.34□□□□□ -0.75
CHMP2A-202ENST00000596708 F5H423 210 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 BUD23O43709 281 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 PDGFAP04085 211 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 NFKB1P19838 968 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 PTPN4P29074 926 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 HNRNPH3P31942 346 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 CCL11P51671 97 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 CTSCP53634 463 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 WNT3AP56704 352 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 RPS18P62269 152 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 ITGA9Q13797 1035 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 NFE2L1Q14494 772 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 LLGL1Q15334 1064 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 C4orf17Q53FE4 359 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 LDLRAP1Q5SW96 308 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 KAZNQ674X7 775 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 ARMC6Q6NXE6 501 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 CERS6Q6ZMG9 384 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 FAM83HQ6ZRV2 1179 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 PID1Q7Z2X4 250 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 GLT6D1Q7Z4J2 308 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 RASGEF1AQ8N9B8 481 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 BLOC1S5Q8TDH9 187 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 TFB1MQ8WVM0 346 aaKnown RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 THAP4Q8WY91 577 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 MR1Q95460 341 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 ZNF514Q96K75 400 aaPredicted RBP10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 RUFY1Q96T51 708 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 SLC25A23Q9BV35 468 aa10.33□□□□□ -0.76
CHMP2A-202ENST00000596708 GPR87Q9BY21 358 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms