RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 CAMK1GQ96NX5 476 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 NDNQ99608 321 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 ZCCHC2Q9C0B9 1178 aaKnown RBP15.26■□□□□ 0.03
SMCO4-206ENST00000596676 RMI1Q9H9A7 625 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 SPASTQ9UBP0 616 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 RABGEF1Q9UJ41 708 aa15.26■□□□□ 0.03
SMCO4-206ENST00000596676 ARHGEF17Q96PE2 2063 aaPredicted RBP15.26■□□□□ 0.03
SMCO4-206ENST00000596676 ZFC3H1O60293 1989 aaKnown RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 GVINP1Q7Z2Y8 2422 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PTPRZ1P23471 2315 aaPredicted RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 CFAP99D6REC4 459 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 H3BM21 787 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 TRIM38O00635 465 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 SNX2O60749 519 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 TRIM16O95361 564 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 GSTA2P09210 222 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PRLHRP49683 370 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 BLKP51451 505 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 CSE1LP55060 971 aaKnown RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 SLMAPQ14BN4 828 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 UAP1Q16222 522 aaPredicted RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 INSCQ1MX18 579 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 ZNF658BQ4V348 819 aaPredicted RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 BCL7AQ4VC05 210 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 STPG1Q5TH74 334 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PTRHD1Q6GMV3 140 aaKnown RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 STRA8Q7Z7C7 330 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 ALYREFQ86V81 257 aaKnown RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 CTAGE3PQ8IX95 158 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 EID2Q8N6I1 236 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PPM1NQ8N819 430 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 CALML6Q8TD86 181 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 AENQ8WTP8 325 aaKnown RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PATE1Q8WXA2 126 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 TCF12Q99081 682 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 TTC1Q99614 292 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 SLC30A3Q99726 388 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 TSPYL1Q9H0U9 437 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 OSGEPL1Q9H4B0 414 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PRDM8Q9NQV8 689 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 TRNAU1APQ9NX07 287 aaKnown RBP15.25■□□□□ 0.03
SMCO4-206ENST00000596676 ZFATQ9P243 1243 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 TBC1D29Q9UFV1 150 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 RAB21Q9UL25 225 aa15.25■□□□□ 0.03
SMCO4-206ENST00000596676 PRR19A6NJB7 356 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 RIPK2O43353 540 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 SH3BP5O60239 455 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 DFNA5O60443 496 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 CCR7P32248 378 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 ACTR1BP42025 376 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 ACTR1AP61163 376 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 ARHGAP8P85298 464 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 TIAL1Q01085 375 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMCO4-206ENST00000596676 SEPT7Q16181 437 aaKnown RBP15.24■□□□□ 0.03
SMCO4-206ENST00000596676 CFAP206Q8IYR0 622 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 HEXDCQ8WVB3 486 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 CCM2Q9BSQ5 444 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 INTS10Q9NVR2 710 aaKnown RBP15.24■□□□□ 0.03
SMCO4-206ENST00000596676 SCHIP1Q9P0W5 487 aaPredicted RBP15.24■□□□□ 0.03
SMCO4-206ENST00000596676 TAAR2Q9P1P5 351 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 SIRPGQ9P1W8 387 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 PSMD13Q9UNM6 376 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 GPR34Q9UPC5 381 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 MED16Q9Y2X0 877 aa15.24■□□□□ 0.03
SMCO4-206ENST00000596676 PRAMEF33A0A0G2JMD5 474 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 GPR89AB7ZAQ6 455 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 LMO7DNF2Z398 122 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 AP2A2O94973 939 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 ANXA6P08133 673 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 OR56A5P0C7T3 313 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 GPR89BP0CG08 455 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 PKMP14618 531 aaKnown RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 RPS3P23396 243 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 RPL10P27635 214 aaKnown RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 PDHA2P29803 388 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 PPARGP37231 505 aaPredicted RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 PREPP48147 710 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 CDKN2DP55273 166 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 ILF3Q12906 894 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 SLC29A2Q14542 456 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 ELOCQ15369 112 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 CEP128Q6ZU80 1094 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 TRMT10CQ7L0Y3 403 aaKnown RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 AMZ2Q86W34 360 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 VRK3Q8IV63 474 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 LMNTD2Q8IXW0 634 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 FAM46DQ8NEK8 389 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 OR2L2Q8NH16 312 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 TIMM29Q9BSF4 260 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 MCMBPQ9BTE3 642 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 AARSD1Q9BTE6 412 aaKnown RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 SARS2Q9NP81 518 aaKnown RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 TSR3Q9UJK0 312 aaKnown RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 WDR37Q9Y2I8 494 aa15.23■□□□□ 0.03
SMCO4-206ENST00000596676 MTO1Q9Y2Z2 717 aaKnown RBP15.23■□□□□ 0.03
SMCO4-206ENST00000596676 MGAT4DA6NG13 374 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 B4DGG1 531 aa15.22■□□□□ 0.03
SMCO4-206ENST00000596676 SIGLEC6O43699 453 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms