RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SEPT6Q14141 434 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 PTPRCAPQ14761 206 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 SEPT7Q16181 437 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 SOWAHCQ53LP3 525 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 FNBP1LQ5T0N5 605 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 GPR155Q7Z3F1 870 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 ZNF761Q86XN6 746 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 DNAAF3Q8N9W5 541 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 OR13C4Q8NGS5 318 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 NAF1Q96HR8 494 aaKnown RBP17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 LINC00615Q96LM1 132 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 FCRL3Q96P31 734 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 DDA1Q9BW61 102 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 ASPSCR1Q9BZE9 553 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 PRORYQ9H606 182 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 GRPEL1Q9HAV7 217 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 ACSL5Q9ULC5 683 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 KCTD3Q9Y597 815 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 PCDHGA3Q9Y5H0 932 aa17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 MN1Q10571 1320 aaPredicted RBP17.42■□□□□ 0.38
SHKBP1-204ENST00000594862 TEX51A0A1B0GUA7 166 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 B4E171 279 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 AP3B1O00203 1094 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 TOX3O15405 576 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 GPR39O43194 453 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 SUN1O94901 812 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 GSTM1P09488 218 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 ANKRD34CP0C6C1 535 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 MC4RP32245 332 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 SLC19A1P41440 591 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 TSPAN7P41732 249 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 MAPK9P45984 424 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 MAPK10P53779 464 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 GSTM4Q03013 218 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 SEMA5AQ13591 1074 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 SKIDA1Q1XH10 827 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 KLHL35Q6PF15 583 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 PPP1R21Q6ZMI0 780 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 OR2L2Q8NH16 312 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 C1orf54Q8WWF1 131 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 NCSTNQ92542 709 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 DNAJC1Q96KC8 554 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 TEFMQ96QE5 360 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 TAAR9Q96RI9 348 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 ZNF624Q9P2J8 865 aaPredicted RBP17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 DRG1Q9Y295 367 aaKnown RBP17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 SSUH2Q9Y2M2 353 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 PCDHB11Q9Y5F2 797 aa17.41■□□□□ 0.38
SHKBP1-204ENST00000594862 HEATR9A2RTY3 570 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 GOLGA6L3A6NEY3 463 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 QSOX1O00391 747 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 UBXN7O94888 489 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 FGGP02679 453 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 SLC35G4P0C7Q5 338 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 BRAFP15056 766 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 ITIH1P19827 911 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 MSNP26038 577 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 RPL10P27635 214 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 PRLHRP49683 370 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 DRG2P55039 364 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 TMPRSS15P98073 1019 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 CACNG1Q06432 222 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 POU6F1Q14863 301 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 METRNLQ641Q3 311 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 NLRP9Q7RTR0 991 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 RCBTB1Q8NDN9 531 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 HM13Q8TCT9 377 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 PEX13Q92968 403 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 USP7Q93009 1102 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 RANBP9Q96S59 729 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 UBL7Q96S82 380 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 CCM2Q9BSQ5 444 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 TLR10Q9BXR5 811 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 ETNK1Q9HBU6 452 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 SLC40A1Q9NP59 571 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 EIF2B3Q9NR50 452 aaKnown RBP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 RAB6BQ9NRW1 208 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 ZDHHC3Q9NYG2 299 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 SCHIP1Q9P0W5 487 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 RIMKLBQ9ULI2 386 aa17.4■□□□□ 0.38
SHKBP1-204ENST00000594862 IGLV3-16A0A075B6K0 115 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 TRBV5-4A0A0C4DH59 114 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 PRAMEF33A0A0G2JMD5 474 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 C17orf113A0A1B0GUU1 675 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 MROH6A6NGR9 719 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 F8W8V4 182 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 PRAMEF10O60809 474 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 ATP1B2P14415 290 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 AMD1P17707 334 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 PSMA3P25788 255 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 ACRV1P26436 265 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 CAPZBP47756 277 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 CXADRP78310 365 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 CFHR1Q03591 330 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 CLN3Q13286 438 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 SNX1Q13596 522 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 ZRANB3Q5FWF4 1079 aa17.39■□□□□ 0.37
SHKBP1-204ENST00000594862 CYB5D1Q6P9G0 228 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms