RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 JPH3Q8WXH2 748 aaPredicted RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 ULK4Q96C45 1275 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 MFSD3Q96ES6 412 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 COPS8Q99627 209 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 NUDT22Q9BRQ3 303 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 TBC1D10AQ9BXI6 508 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 TREX1Q9NSU2 369 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 TMEM9Q9P0T7 183 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CPNE7Q9UBL6 633 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 ENTPD2Q9Y5L3 495 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CFAP20Q9Y6A4 193 aaKnown RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 D6RAR5 112 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 GOLGA8TH3BQL2 631 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 TTI1O43156 1089 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 GAS8O95995 478 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 MPOP05164 745 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 ATP1B2P14415 290 aaPredicted RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 IVDP26440 423 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 CASQ1P31415 396 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 CSF2RBP32927 897 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 UBE2IP63279 158 aaKnown RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 HHEXQ03014 270 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 BIRC2Q13490 618 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 PTK6Q13882 451 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 SPIDRQ14159 915 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 BCL7AQ4VC05 210 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 RNASEH2BQ5TBB1 312 aaKnown RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 DUS1LQ6P1R4 473 aaKnown RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 RBM44Q6ZP01 1051 aaKnown RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 NAT8LQ8N9F0 302 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 GPR150Q8NGU9 434 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 OR4L1Q8NH43 312 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 DCUN1D1Q96GG9 259 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 FCRL3Q96P31 734 aaPredicted RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 SERPINB12Q96P63 405 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 DEPDC7Q96QD5 511 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 GFM1Q96RP9 751 aaKnown RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 KRT12Q99456 494 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 NRTNQ99748 197 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 C19orf43Q9BQ61 176 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 KIFC1Q9BW19 673 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 ZCCHC2Q9C0B9 1178 aaKnown RBP11.31□□□□□ -0.6
VMP1-211ENST00000591315 SEMA6CQ9H3T2 930 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 BFARQ9NZS9 450 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 ASIC3Q9UHC3 531 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 PCYOX1Q9UHG3 505 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 RIMKLBQ9ULI2 386 aa11.31□□□□□ -0.6
VMP1-211ENST00000591315 IGHV1OR21-1A0A087WYE8 117 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 MGAT4DA6NG13 374 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 PROS1P07225 676 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 HGFP14210 728 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 PNLIPP16233 465 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 ITGB6P18564 788 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 IDSP22304 550 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 MAPK9P45984 424 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 FASLGP48023 281 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 PRLHRP49683 370 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 CDK16Q00536 496 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 DMPKQ09013 629 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 NR1D2Q14995 579 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 ZNF658BQ4V348 819 aaPredicted RBP11.3□□□□□ -0.6
VMP1-211ENST00000591315 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 METRNLQ641Q3 311 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 AFTPHQ6ULP2 937 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 ABRAXAS1Q6UWZ7 409 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 JAMLQ86YT9 394 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 CFAP206Q8IYR0 622 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 MCUQ8NE86 351 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 OR6C4Q8NGE1 309 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 OR2L2Q8NH16 312 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 LKAAEAR1Q8TD35 194 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 GRK7Q8WTQ7 553 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 RMDN2Q96LZ7 410 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 C16orf45Q96MC5 204 aaPredicted RBP11.3□□□□□ -0.6
VMP1-211ENST00000591315 INSM2Q96T92 566 aaPredicted RBP11.3□□□□□ -0.6
VMP1-211ENST00000591315 TRIM31Q9BZY9 425 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 IL22Q9GZX6 179 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 WWP1Q9H0M0 922 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 SARS2Q9NP81 518 aaKnown RBP11.3□□□□□ -0.6
VMP1-211ENST00000591315 KCNK4Q9NYG8 393 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 SOX13Q9UN79 622 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 LAMA5O15230 3695 aa11.3□□□□□ -0.6
VMP1-211ENST00000591315 KMT2BQ9UMN6 2715 aaPredicted RBP11.3□□□□□ -0.6
VMP1-211ENST00000591315 ZFYVE26Q68DK2 2539 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 IQCF5A8MTL0 148 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 DNALI1O14645 258 aaPredicted RBP11.29□□□□□ -0.6
VMP1-211ENST00000591315 CD3EAPO15446 510 aaKnown RBP11.29□□□□□ -0.6
VMP1-211ENST00000591315 BRINP1O60477 761 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 VAPBO95292 243 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 TYRP1P17643 537 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 PDHA2P29803 388 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 MAGEA3P43357 314 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 PREPP48147 710 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 PRAMEP78395 509 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 DR1Q01658 176 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 C2orf54Q08AI8 447 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 RPE65Q16518 533 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 C3orf38Q5JPI3 329 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms