RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TRAF7Q6Q0C0 670 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 TRPV3Q8NET8 790 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 YME1L1Q96TA2 773 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 WDR12Q9GZL7 423 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 TDRKHQ9Y2W6 561 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 RPS24P62847 133 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 SMARCB1Q12824 385 aa16.92■□□□□ 0.3
SMARCA4-215ENST00000590574 ANGPTL1O95841 491 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 AQP1P29972 269 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 ECT2LQ008S8 904 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 RSBN1Q5VWQ0 802 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 SVOPLQ8N434 492 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 TMEM40Q8WWA1 233 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 TRIM8Q9BZR9 551 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 KCTD5Q9NXV2 234 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 CIDEBQ9UHD4 219 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 PTGDR2Q9Y5Y4 395 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 CLIC3O95833 236 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 SERPINA1P01009 418 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 ATP4BP51164 291 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 MS4A2Q01362 244 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 FOXM1Q08050 763 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 NCF4Q15080 339 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 POM121L1PQ3SYA9 428 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 CHSY3Q70JA7 882 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 POP5Q969H6 163 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 NSMCE3Q96MG7 304 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 NODALQ96S42 347 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 CCNB1IP1Q9NPC3 277 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 AHSPQ9NZD4 102 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 VPS4AQ9UN37 437 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 DOLKQ9UPQ8 538 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 A0A1W2PP18 115 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 SNTNA6NMZ2 147 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 SUV39H1O43463 412 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 PAPSS2O95340 614 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 GLDCP23378 1020 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 KIR3DL1P43629 444 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 DGKQP52824 942 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 SPIBQ01892 262 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 ATXN7L2Q5T6C5 722 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 CCSER2Q9H7U1 834 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 TRNAU1APQ9NX07 287 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 KPNA5O15131 536 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 UGT1A6P19224 532 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 CDC42P60953 191 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 BTG3Q14201 252 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 TJAP1Q5JTD0 557 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 NSUN5Q96P11 429 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 IFT80Q9P2H3 777 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 DNAJB9Q9UBS3 223 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 SCML2Q9UQR0 700 aa16.91■□□□□ 0.3
SMARCA4-215ENST00000590574 SLC38A8A6NNN8 435 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 FPGTO14772 594 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 RPIAP49247 311 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 STC1P52823 247 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 TP53BP2Q13625 1128 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 DAG1Q14118 895 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PAGE2BQ5JRK9 111 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PDPRQ8NCN5 879 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 ATL1Q8WXF7 558 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 NUAK2Q9H093 628 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 TMEM248Q9NWD8 314 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 CORO2BQ9UQ03 480 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PNMA8CA0A1B0GUJ8 204 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 IL6P05231 212 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 SPAM1P38567 509 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 ALFQ53S48 1182 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PAGE2Q7Z2X7 111 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 EEF1AKMT1Q8WVE0 214 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 TMBIM1Q969X1 311 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 DNAJC25-GNG10A0A024R161 153 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 TUBA4AP68366 448 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 GRB7Q14451 532 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 UPP1Q16831 310 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 SETMARQ53H47 684 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 FUT10Q6P4F1 479 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 AMER2Q8N7J2 671 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 POC5Q8NA72 575 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 DERL2Q9GZP9 239 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 SH3GLB1Q9Y371 365 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 FABP3P05413 133 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 DIO3P55073 304 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 CDKN2DP55273 166 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PURAQ00577 322 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 SULT1C3Q6IMI6 304 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PROX1Q92786 737 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 KIAA1191Q96A73 305 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 ZUFSPQ96AP4 578 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 BIRC7Q96CA5 298 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 TNKS2Q9H2K2 1166 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PREBQ9HCU5 417 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 ZIM2Q9NZV7 527 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PHKG1Q16816 387 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 TYW3Q6IPR3 259 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 TRAPPC5Q8IUR0 188 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 OR4A15Q8NGL6 344 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 CGREF1Q99674 301 aa16.9■□□□□ 0.3
SMARCA4-215ENST00000590574 PAAF1Q9BRP4 392 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms