RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 DET1Q7L5Y6 550 aa20.21■□□□□ 0.83
CIRBP-226ENST00000590171 FAM129CQ86XR2 697 aa20.21■□□□□ 0.83
CIRBP-226ENST00000590171 TAB3Q8N5C8 712 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-226ENST00000590171 BEND7Q8N7W2 519 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-226ENST00000590171 CCDC112Q8NEF3 446 aa20.21■□□□□ 0.83
CIRBP-226ENST00000590171 LRRC45Q96CN5 670 aa20.21■□□□□ 0.83
CIRBP-226ENST00000590171 SLC40A1Q9NP59 571 aa20.21■□□□□ 0.83
CIRBP-226ENST00000590171 B3GALT1Q9Y5Z6 326 aa20.21■□□□□ 0.83
CIRBP-226ENST00000590171 DNMT3AQ9Y6K1 912 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-226ENST00000590171 ZNF106Q9H2Y7 1883 aaKnown RBP20.21■□□□□ 0.83
CIRBP-226ENST00000590171 MN1Q10571 1320 aaPredicted RBP20.21■□□□□ 0.83
CIRBP-226ENST00000590171 BPTFQ12830 3046 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 AGAP14A8MT82 685 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 B4E171 279 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 CCL22O00626 93 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 UBXN7O94888 489 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 TYRP1P17643 537 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 PBLDP30039 288 aaPredicted RBP20.2■□□□□ 0.82
CIRBP-226ENST00000590171 TSPAN7P41732 249 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 GFERP55789 205 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 RHDQ02161 417 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 GPR18Q14330 331 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 NFE2L1Q14494 772 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 P3H1Q32P28 736 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 SEL1L2Q5TEA6 688 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 MICALCLQ6ZW33 695 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 SLC39A7Q92504 469 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 CXorf40BQ96DE9 158 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 SGF29Q96ES7 293 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 C19orf43Q9BQ61 176 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 DDA1Q9BW61 102 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 LRRC40Q9H9A6 602 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 SLC39A1Q9NY26 324 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 PSMD13Q9UNM6 376 aa20.2■□□□□ 0.82
CIRBP-226ENST00000590171 SMG1Q96Q15 3661 aaKnown RBP20.19■□□□□ 0.82
CIRBP-226ENST00000590171 EIF4E1BA6NMX2 242 aaKnown RBP20.19■□□□□ 0.82
CIRBP-226ENST00000590171 ERVH48-1M5A8F1 160 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 C9P02748 559 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 HADHAP40939 763 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 HALP42357 657 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 ANKS6Q68DC2 871 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 VASH2Q86V25 355 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 PLXDC1Q8IUK5 500 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 RBM12BQ8IXT5 1001 aaKnown RBP20.19■□□□□ 0.82
CIRBP-226ENST00000590171 GPR150Q8NGU9 434 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 RTP4Q96DX8 246 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 ZNF514Q96K75 400 aaPredicted RBP20.19■□□□□ 0.82
CIRBP-226ENST00000590171 DNAJC1Q96KC8 554 aaKnown RBP20.19■□□□□ 0.82
CIRBP-226ENST00000590171 CRLS1Q9UJA2 301 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 PCDHB11Q9Y5F2 797 aa20.19■□□□□ 0.82
CIRBP-226ENST00000590171 STMND1H3BQB6 276 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 SGTAO43765 313 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 LIASO43766 372 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 AP2A1O95782 977 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 PRB1P04280 392 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 AMD1P17707 334 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 TPH1P17752 444 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 COL9A2Q14055 689 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-226ENST00000590171 OASLQ15646 514 aaKnown RBP20.18■□□□□ 0.82
CIRBP-226ENST00000590171 MEI1Q5TIA1 1274 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 KIAA1614Q5VZ46 1190 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 XKR5Q6UX68 686 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 SNX20Q7Z614 316 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 SLC13A5Q86YT5 568 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-226ENST00000590171 NXPE1Q8N323 547 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 LSM14AQ8ND56 463 aaKnown RBP20.18■□□□□ 0.82
CIRBP-226ENST00000590171 JPH3Q8WXH2 748 aaPredicted RBP20.18■□□□□ 0.82
CIRBP-226ENST00000590171 TTC9Q92623 222 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 RSC1A1Q92681 617 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 FAM96AQ9H5X1 160 aa20.18■□□□□ 0.82
CIRBP-226ENST00000590171 PIH1D1Q9NWS0 290 aaKnown RBP20.18■□□□□ 0.82
CIRBP-226ENST00000590171 TK2O00142 265 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 ANKRD34CP0C6C1 535 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 ITGALP20701 1170 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 MC4RP32245 332 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 CAPZBP47756 277 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 LEPRP48357 1165 aaKnown RBP20.17■□□□□ 0.82
CIRBP-226ENST00000590171 RAB15P59190 212 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 MC2RQ01718 297 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 POU6F1Q14863 301 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 RPE65Q16518 533 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 BCL7AQ4VC05 210 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 MANEAQ5SRI9 462 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 DCAF12Q5T6F0 453 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 METRNLQ641Q3 311 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 OR2L2Q8NH16 312 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 UBE2Q2Q8WVN8 375 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 ULK4Q96C45 1275 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 C9orf72Q96LT7 481 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 TGM7Q96PF1 710 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 CTRCQ99895 268 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 ASPSCR1Q9BZE9 553 aa20.17■□□□□ 0.82
CIRBP-226ENST00000590171 MGAT4DA6NG13 374 aa20.16■□□□□ 0.82
CIRBP-226ENST00000590171 H7C0S8 307 aa20.16■□□□□ 0.82
CIRBP-226ENST00000590171 CAPN5O15484 640 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-226ENST00000590171 PSMD3O43242 534 aa20.16■□□□□ 0.82
CIRBP-226ENST00000590171 WT1P19544 449 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-226ENST00000590171 STIP1P31948 543 aaKnown RBP20.16■□□□□ 0.82
CIRBP-226ENST00000590171 CDKN1CP49918 316 aaPredicted RBP20.16■□□□□ 0.82
CIRBP-226ENST00000590171 SEPT6Q14141 434 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms