RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 GPR89BP0CG08 455 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 FECHP22830 423 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 HNRNPH3P31942 346 aaKnown RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 CA5AP35218 305 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 SERPINB6P35237 376 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 DCDC1P59894 354 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 ABRQ12979 859 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 RAPSNQ13702 412 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 GALNT3Q14435 633 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 GPR19Q15760 415 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 PLEKHN1Q494U1 663 aaPredicted RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 ANKRD20A8PQ5CZ79 823 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 CRB2Q5IJ48 1285 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 CT47A1Q5JQC4 288 aaPredicted RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 FAM198BQ6UWH4 519 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 FAM83HQ6ZRV2 1179 aaPredicted RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 LRRTM4Q86VH4 590 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 D2HGDHQ8N465 521 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 ZBTB2Q8N680 514 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 ENDOVQ8N8Q3 282 aaKnown RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 SIDT2Q8NBJ9 832 aaKnown RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 TEKT4Q8WW24 435 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 SEC14L1Q92503 715 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 FATE1Q969F0 183 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 GLYATL1Q969I3 302 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 ZNF653Q96CK0 615 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 ZNF501Q96CX3 271 aaPredicted RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 BTBD6Q96KE9 485 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 FCRL4Q96PJ5 515 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 SMAD5Q99717 465 aaKnown RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 NUP85Q9BW27 656 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 SPATA16Q9BXB7 569 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 SLAMF7Q9NQ25 335 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 RBM22Q9NW64 420 aaKnown RBP eCLIP10.62□□□□□ -0.71
GRN-216ENST00000589923 NFKBIL1Q9UBC1 381 aaPredicted RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 NTNG1Q9Y2I2 539 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 TTLL3Q9Y4R7 772 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 PCDHGB7Q9Y5F8 929 aa10.62□□□□□ -0.71
GRN-216ENST00000589923 DIDO1Q9BTC0 2240 aaKnown RBP10.62□□□□□ -0.71
GRN-216ENST00000589923 SSU72P8A0A1W2PR75 194 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 A6NL46 340 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 KMOO15229 486 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 ZNF185O15231 689 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 DDX3YO15523 660 aaKnown RBP10.61□□□□□ -0.71
GRN-216ENST00000589923 SCRG1O75711 98 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 RORAP35398 523 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 CD86P42081 329 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 ZNF165P49910 485 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 RPS15P62841 145 aaKnown RBP10.61□□□□□ -0.71
GRN-216ENST00000589923 UBXN1Q04323 297 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 ZBTB17Q13105 803 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 PAFAH1B3Q15102 231 aaKnown RBP10.61□□□□□ -0.71
GRN-216ENST00000589923 BOLA3Q53S33 107 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 ZNF789Q5FWF6 425 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 PLEKHS1Q5SXH7 462 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 FBXO38Q6PIJ6 1188 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 TRAM1L1Q8N609 369 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 CNTD1Q8N815 330 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 GLIS1Q8NBF1 620 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 UBXN4Q92575 508 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 MR1Q95460 341 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 CXorf40BQ96DE9 158 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 TSGA13Q96PP4 275 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 BARD1Q99728 777 aaKnown RBP10.61□□□□□ -0.71
GRN-216ENST00000589923 ZSCAN5AQ9BUG6 496 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 MLPHQ9BV36 600 aaPredicted RBP10.61□□□□□ -0.71
GRN-216ENST00000589923 SLC29A3Q9BZD2 475 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 HAUS4Q9H6D7 363 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 MAP10Q9P2G4 905 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 MYO1AQ9UBC5 1043 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 TCFL5Q9UL49 500 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 SHOC2Q9UQ13 582 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 SLC5A6Q9Y289 635 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 PCM1Q15154 2024 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 CCDC88CQ9P219 2028 aa10.61□□□□□ -0.71
GRN-216ENST00000589923 TLCD2A6NGC4 264 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 LRRC10BA6NIK2 292 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 LRRC53A6NM62 1247 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 AURKAO14965 403 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 GPR39O43194 453 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 LCA5LO95447 670 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 SLC4A1P02730 911 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 GZMAP12544 262 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 BPIP17213 487 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 ELAVL4P26378 380 aaKnown RBP10.6□□□□□ -0.71
GRN-216ENST00000589923 TUBB4BP68371 445 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 ACY1Q03154 408 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 GBE1Q04446 702 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 SLC10A2Q12908 348 aaPredicted RBP10.6□□□□□ -0.71
GRN-216ENST00000589923 ATP1A4Q13733 1029 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 TUBB2AQ13885 445 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 DPYSL3Q14195 570 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 RPE65Q16518 533 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 ATP13A4Q4VNC1 1196 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 ZRANB3Q5FWF4 1079 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 DUS1LQ6P1R4 473 aaKnown RBP10.6□□□□□ -0.71
GRN-216ENST00000589923 TMC3Q7Z5M5 1100 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 LRRC49Q8IUZ0 686 aa10.6□□□□□ -0.71
GRN-216ENST00000589923 TMEM151BQ8IW70 566 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms