RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 H2AFVQ71UI9 128 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 IRF2BP2Q7Z5L9 587 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 PHLDB2Q86SQ0 1253 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 NOP9Q86U38 636 aaKnown RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 BIVMQ86UB2 503 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 FAM131BQ86XD5 332 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 GALNT13Q8IUC8 556 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 DSELQ8IZU8 1212 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 CLEC1AQ8NC01 280 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 C1orf131Q8NDD1 294 aaKnown RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 CASKIN2Q8WXE0 1202 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 TM9SF4Q92544 642 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 ZNF653Q96CK0 615 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 C18orf8Q96DM3 657 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 ZNF514Q96K75 400 aaPredicted RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 CALR3Q96L12 384 aaKnown RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 LRFN5Q96NI6 719 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 AGAP3Q96P47 875 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 TUBGCP5Q96RT8 1024 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 HERPUD2Q9BSE4 406 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 MLPHQ9BV36 600 aaPredicted RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 SELENOOQ9BVL4 669 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 STN1Q9H668 368 aaKnown RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 UCK1Q9HA47 277 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 PDFQ9HBH1 243 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 MRPL47Q9HD33 250 aaKnown RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 TMEM51Q9NW97 253 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 ADAM22Q9P0K1 906 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 SH3BGRL2Q9UJC5 107 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 NOCTQ9UK39 431 aaKnown RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 ADAM21Q9UKJ8 722 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 HPCAL4Q9UM19 191 aa5.97□□□□□ -1.45
VPS25-204ENST00000589577 EPN1Q9Y6I3 576 aaPredicted RBP5.97□□□□□ -1.45
VPS25-204ENST00000589577 CPAMD8Q8IZJ3 1885 aa5.96□□□□□ -1.45
VPS25-204ENST00000589577 SOWAHDA6NJG2 315 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 TMCO5BA8MYB1 307 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 EIF3CLB5ME19 914 aaKnown RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 FANCGO15287 622 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 WIPF1O43516 503 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 SNX2O60749 519 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 WISP2O76076 250 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 HEXIM1O94992 359 aaKnown RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 ACP5P13686 325 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 OTX2P32243 289 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 FLT3P36888 993 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 MAGEA1P43355 309 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 FOXL2P58012 376 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 NOMO3P69849 1222 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 PDE1BQ01064 536 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 FMO1Q01740 532 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 NRG1Q02297 640 aaPredicted RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 ABRQ12979 859 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 GRM3Q14832 879 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 NCF4Q15080 339 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 CEBPEQ15744 281 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 GPR19Q15760 415 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 SLC25A52Q3SY17 297 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ODF2Q5BJF6 829 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ZNF789Q5FWF6 425 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 CFAP58Q5T655 872 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 FAM102AQ5T9C2 384 aaPredicted RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 DENND2CQ68D51 928 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 FCRL6Q6DN72 434 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ACAD10Q6JQN1 1059 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 RWDD4Q6NW29 188 aaKnown RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 DPY19L2P1Q6NXN4 242 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 DNAJC24Q6P3W2 148 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 MTFR2Q6P444 385 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 GFRALQ6UXV0 394 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ADAMTSL4Q6UY14 1074 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 CHST15Q7LFX5 561 aaPredicted RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 ZNF571Q7Z3V5 609 aaPredicted RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 TMEM126BQ8IUX1 230 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 RHOT2Q8IXI1 618 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 BCORP1Q8N888 145 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 SIDT2Q8NBJ9 832 aaKnown RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 DNAJB14Q8TBM8 379 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ADAMTS18Q8TE60 1221 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 SLC20A1Q8WUM9 679 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 NR4A3Q92570 626 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ZNF501Q96CX3 271 aaPredicted RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 COX14Q96I36 57 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ALS2CR12Q96Q35 445 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 AGAP2Q99490 1192 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 EIF3CQ99613 913 aaKnown RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 C11orf70Q9BRQ4 267 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 RAB33BQ9H082 229 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 LIME1Q9H400 295 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 PCMTD2Q9NV79 361 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 PARVAQ9NVD7 372 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS25-204ENST00000589577 CTTNBP2NLQ9P2B4 639 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ZNF624Q9P2J8 865 aaPredicted RBP5.96□□□□□ -1.46
VPS25-204ENST00000589577 EPHA6Q9UF33 1036 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 OR12D3Q9UGF7 316 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 INTUQ9ULD6 942 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 STAP1Q9ULZ2 295 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 ANK2Q01484 3957 aa5.96□□□□□ -1.46
VPS25-204ENST00000589577 A0A087X0T9 212 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 GOLGA6CA6NDK9 693 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms