RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 COPG2Q9UBF2 871 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 XPR1Q9UBH6 696 aa21.95■■□□□ 1.1
ATG4D-209ENST00000588857 OR2AG2A6NM03 316 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 TK2O00142 265 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 CDK14O94921 469 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 SEMA4FO95754 770 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 MYL2P10916 166 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 TFEBP19484 476 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 DGKAP23743 735 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 RGS4P49798 205 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 INPP5AQ14642 412 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 ADGRG6Q86SQ4 1221 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 EEF1AKMT1Q8WVE0 214 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 SREK1Q8WXA9 508 aaKnown RBP21.94■■□□□ 1.1
ATG4D-209ENST00000588857 MECRQ9BV79 373 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 OR2AG1Q9H205 316 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 WDR26Q9H7D7 661 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 LATS2Q9NRM7 1088 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 KLHL42Q9P2K6 505 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 CYP8B1Q9UNU6 501 aa21.94■■□□□ 1.1
ATG4D-209ENST00000588857 GMNCA6NCL1 334 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 KPNA5O15131 536 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 SLC31A1O15431 190 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 GALR2O43603 387 aaPredicted RBP21.93■■□□□ 1.1
ATG4D-209ENST00000588857 VEGFDO43915 354 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 ZNF217O75362 1048 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 APBB3O95704 486 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 CDK3Q00526 305 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 TECRLQ5HYJ1 363 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 COX14Q96I36 57 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 ALG9Q9H6U8 611 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 MANSC1Q9H8J5 431 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 MBD1Q9UIS9 605 aaPredicted RBP21.93■■□□□ 1.1
ATG4D-209ENST00000588857 MUC6Q6W4X9 2439 aa21.93■■□□□ 1.1
ATG4D-209ENST00000588857 WDFY4Q6ZS81 3184 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 SRRM3A6NNA2 597 aaPredicted RBP21.92■■□□□ 1.1
ATG4D-209ENST00000588857 TCP11X1B4DZS4 312 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 ZBTB14O43829 449 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 VIMP08670 466 aaKnown RBP21.92■■□□□ 1.1
ATG4D-209ENST00000588857 KCNA4P22459 653 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 ALDH3A1P30838 453 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 PCLAFQ15004 111 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 TMEM220Q6QAJ8 160 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 ISCA2Q86U28 154 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 TMEM151AQ8N4L1 468 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 PPP1R14CQ8TAE6 165 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 ZNF75CPQ92670 426 aaPredicted RBP21.92■■□□□ 1.1
ATG4D-209ENST00000588857 CHMP6Q96FZ7 201 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 PDLIM5Q96HC4 596 aaKnown RBP21.92■■□□□ 1.1
ATG4D-209ENST00000588857 ZNF514Q96K75 400 aaPredicted RBP21.92■■□□□ 1.1
ATG4D-209ENST00000588857 TEX101Q9BY14 249 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 TFB2MQ9H5Q4 396 aaKnown RBP21.92■■□□□ 1.1
ATG4D-209ENST00000588857 PHPT1Q9NRX4 125 aaPredicted RBP21.92■■□□□ 1.1
ATG4D-209ENST00000588857 ATXN10Q9UBB4 475 aa21.92■■□□□ 1.1
ATG4D-209ENST00000588857 G3V2L1 256 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 RAD51BO15315 384 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 SGTAO43765 313 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TSPAN12O95859 305 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 DCNP07585 359 aaKnown RBP21.91■■□□□ 1.1
ATG4D-209ENST00000588857 BGNP21810 368 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 AOAHP28039 575 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CCR7P32248 378 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TRIM23P36406 574 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 PRLHRP49683 370 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CTSCP53634 463 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 SEC24CP53992 1094 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TCF15Q12870 199 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 MTAPQ13126 283 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 ZYG11AQ6WRX3 759 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 C10orf107Q8IVU9 208 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 ELMO1Q92556 727 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 KIAA1191Q96A73 305 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TOE1Q96GM8 510 aaKnown RBP21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CCM2Q9BSQ5 444 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 EPN3Q9H201 632 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 SIRPGQ9P1W8 387 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 ANKRD12Q6UB98 2062 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TARM1B6A8C7 271 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 SBK3P0C264 359 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CBSLP0DN79 551 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TAC1P20366 129 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CD6P30203 668 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CBSP35520 551 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 GABPB1Q06547 395 aaPredicted RBP21.91■■□□□ 1.1
ATG4D-209ENST00000588857 BOP1Q14137 746 aaKnown RBP21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CHI3L2Q15782 390 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 RGS9BPQ6ZS82 235 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TRAPPC5Q8IUR0 188 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 MYO1HQ8N1T3 1032 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 BEND7Q8N7W2 519 aaPredicted RBP21.91■■□□□ 1.1
ATG4D-209ENST00000588857 DTWD2Q8NBA8 298 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 RHEBL1Q8TAI7 183 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 RAB3IL1Q8TBN0 382 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 STAG3L4Q8TBR4 150 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 PTERQ96BW5 349 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TPSD1Q9BZJ3 242 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 DLGAP2Q9P1A6 1054 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 TMEM98Q9Y2Y6 226 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 OR1A2Q9Y585 309 aa21.91■■□□□ 1.1
ATG4D-209ENST00000588857 CCDC189A1A4V9 331 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms