RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 INTS10Q9NVR2 710 aaKnown RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 NLGN3Q9NZ94 848 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 NINJ2Q9NZG7 142 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 TAAR2Q9P1P5 351 aa18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 COL5A1P20908 1838 aaPredicted RBP18.67■□□□□ 0.58
CLPTM1-209ENST00000588855 S1PR4O95977 384 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 TNFRSF8P28908 595 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 EIF3BP55884 814 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 MGAT5Q09328 741 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 INAVAQ3KP66 663 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 C3orf62Q6ZUJ4 267 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 AMZ2Q86W34 360 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 RELL1Q8IUW5 271 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 SDR16C5Q8N3Y7 309 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 C2CD4AQ8NCU7 369 aaPredicted RBP18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 UBXN4Q92575 508 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 LINC00615Q96LM1 132 aaPredicted RBP18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 CDC42EP4Q9H3Q1 356 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 OSGEPL1Q9H4B0 414 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 SPATS2LQ9NUQ6 558 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 GULP1Q9UBP9 304 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 FAM8A1Q9UBU6 413 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 CRYL1Q9Y2S2 319 aa18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 DNMT3AQ9Y6K1 912 aaPredicted RBP18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 GOLGA4Q13439 2230 aaKnown RBP18.66■□□□□ 0.58
CLPTM1-209ENST00000588855 TCRBV9S1A1TA0A576 114 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 PRR19A6NJB7 356 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 TPP1O14773 563 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 PFDN6O15212 129 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 SIGLEC6O43699 453 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 PIAS1O75925 651 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 GSTA2P09210 222 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 FAM153BP0C7A2 387 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 OR56A5P0C7T3 313 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 ALPPL2P10696 532 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 NFE2L1Q14494 772 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 KYNUQ16719 465 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 ERCC6LQ2NKX8 1250 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 FAM153CQ494X1 144 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 CTSL3PQ5NE16 218 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 C6orf132Q5T0Z8 1188 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 SFTPA2Q8IWL1 248 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 FAM46DQ8NEK8 389 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 LKAAEAR1Q8TD35 194 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 RHBDD1Q8TEB9 315 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 SCG3Q8WXD2 468 aaKnown RBP18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 VPS37BQ9H9H4 285 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 SMYD2Q9NRG4 433 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 ZFATQ9P243 1243 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 CDV3Q9UKY7 258 aaKnown RBP18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 PCOLCE2Q9UKZ9 415 aa18.65■□□□□ 0.58
CLPTM1-209ENST00000588855 MGAT4DA6NG13 374 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 IQCF5A8MTL0 148 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 B4DGG1 531 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 SLC30A4O14863 429 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 EML2O95834 649 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 RPS3P23396 243 aaKnown RBP eCLIP18.64■□□□□ 0.584e-8■■■■■ 27.4
CLPTM1-209ENST00000588855 FMO4P31512 558 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 VSNL1P62760 191 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 DMPKQ09013 629 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 LVRNQ6Q4G3 990 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 XKR5Q6UX68 686 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 FAM83HQ6ZRV2 1179 aaPredicted RBP18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 PIP4P1Q86T03 277 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 LRRC6Q86X45 466 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 EIF1ADQ8N9N8 165 aaKnown RBP18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 OR2L2Q8NH16 312 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 GABPB2Q8TAK5 448 aaPredicted RBP18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 BIRC8Q96P09 236 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 CCM2Q9BSQ5 444 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 DUSP23Q9BVJ7 150 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 DPEP2Q9H4A9 486 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 SIRPGQ9P1W8 387 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 TBC1D29Q9UFV1 150 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 GNPTGQ9UJJ9 305 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 VPS9D1Q9Y2B5 631 aa18.64■□□□□ 0.58
CLPTM1-209ENST00000588855 QSOX1O00391 747 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 SNX2O60749 519 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 CBFA2T3O75081 653 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 SPAG6O75602 509 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 HAUS5O94927 633 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 C1QAP02745 245 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 FTH1P02794 183 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 VCLP18206 1134 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 ITGB6P18564 788 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 GABRB3P28472 473 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 LEPRP48357 1165 aaKnown RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 CLCNKAP51800 687 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 ADARP55265 1226 aaKnown RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 RSPO4Q2I0M5 234 aaPredicted RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 ZNF658BQ4V348 819 aaPredicted RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 PTRHD1Q6GMV3 140 aaKnown RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 ZCCHC8Q6NZY4 707 aaKnown RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 CNSTQ6PJW8 725 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 KRT222Q8N1A0 295 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 LILRA3Q8N6C8 439 aaPredicted RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 BAHD1Q8TBE0 780 aaPredicted RBP18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 FBF1Q8TES7 1133 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 ZDHHC1Q8WTX9 485 aa18.64■□□□□ 0.57
CLPTM1-209ENST00000588855 PCDHB1Q9Y5F3 818 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms