RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 DCTN4Q9UJW0 460 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 FZD4Q9ULV1 537 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 TMCO1Q9UM00 188 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 UNC80Q8N2C7 3258 aa11.24□□□□□ -0.61
SMAD4-205ENST00000588745 EYSQ5T1H1 3165 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 MYO10Q9HD67 2058 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 A0A0G2JND7 137 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 TCRBV21S2A2A0A5A6 115 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 IGLON5A6NGN9 336 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 KPNA5O15131 536 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 KLK8O60259 260 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 PCCBP05166 539 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 CHRNGP07510 517 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 KITP10721 976 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 GFAPP14136 432 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 IMPDH1P20839 514 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 CD72P21854 359 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 CCR10P46092 362 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ARFIP2P53365 341 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 CTSCP53634 463 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ADPRHP54922 357 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 HERVK_113P63132 956 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 TFF2Q03403 129 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 SFSWAPQ12872 951 aaKnown RBP11.23□□□□□ -0.61
SMAD4-205ENST00000588745 TMEM115Q12893 351 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-205ENST00000588745 GBX1Q14549 363 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 BCL7AQ4VC05 210 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 CFAP157Q5JU67 520 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 PLEKHS1Q5SXH7 462 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 SEL1L3Q68CR1 1132 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 SBSNQ6UWP8 590 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 USP30Q70CQ3 517 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 FRA10AC1Q70Z53 315 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 RAB44Q7Z6P3 723 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-205ENST00000588745 TRIM74Q86UV6 250 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 KBTBD6Q86V97 674 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 WDR75Q8IWA0 830 aaKnown RBP11.23□□□□□ -0.61
SMAD4-205ENST00000588745 LSMEM2Q8N112 164 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 FBXO39Q8N4B4 442 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ZNF781Q8N8C0 355 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 RASGEF1AQ8N9B8 481 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ELMO1Q92556 727 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 RMDN2Q96LZ7 410 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ERVK-6Q9BXR3 956 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 EPHX3Q9H6B9 360 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 KCNK13Q9HB14 408 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ACSS2Q9NR19 701 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 KCNK4Q9NYG8 393 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 NUDT4Q9NZJ9 180 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 TSR3Q9UJK0 312 aaKnown RBP11.23□□□□□ -0.61
SMAD4-205ENST00000588745 HAO1Q9UJM8 370 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ZFR2Q9UPR6 939 aaKnown RBP11.23□□□□□ -0.61
SMAD4-205ENST00000588745 RAP2CQ9Y3L5 183 aa11.23□□□□□ -0.61
SMAD4-205ENST00000588745 ATXN2Q99700 1313 aaKnown RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 OR2AG2A6NM03 316 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 STX16-NPEPL1H3BU86 382 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 STX16O14662 325 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 NUAK1O60285 661 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 RNGTTO60942 597 aaKnown RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 ATG13O75143 517 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 NDUFV2P19404 249 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 MPSTP25325 297 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 TEAD1P28347 426 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 HK2P52789 917 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 HK3P52790 923 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 AQP5P55064 265 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 RPS21P63220 83 aaKnown RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PRKCQQ04759 706 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 IFT88Q13099 833 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PRKAA1Q13131 559 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 GTF2H3Q13889 308 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 BOP1Q14137 746 aaKnown RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PPP1R3AQ16821 1122 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PFKFB4Q16877 469 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 WSCD2Q2TBF2 565 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 TMEM259Q4ZIN3 620 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 ARL13AQ5H913 290 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 ZNF678Q5SXM1 525 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PNCKQ6P2M8 343 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 KIAA1324Q6UXG2 1013 aaKnown RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 ZNF852Q6ZMS4 543 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 FRMD7Q6ZUT3 714 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 ADGRG6Q86SQ4 1221 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 GPSM1Q86YR5 675 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 BEND7Q8N7W2 519 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PLA2G15Q8NCC3 412 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 OR14C36Q8NHC7 312 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 MOCOSQ96EN8 888 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 COX14Q96I36 57 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 CNDP1Q96KN2 507 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 MRGPRX1Q96LB2 322 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 TRMOQ9BU70 441 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 FAM126AQ9BYI3 521 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-205ENST00000588745 GSTO2Q9H4Y5 243 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PREBQ9HCU5 417 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
SMAD4-205ENST00000588745 PNPOQ9NVS9 261 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms