RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	ALG2	Q9H553	416 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	HEBP1	Q9NRV9	189 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ETAA1	Q9NY74	926 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TRPM5	Q9NZQ8	1165 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CIDEB	Q9UHD4	219 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	AURKC	Q9UQB9	309 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RAI2	Q9Y5P3	530 aa		13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.89	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CACNA1A	O00555	2505 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	C7orf72	A4D263	438 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CARNS1	A5YM72	827 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CCL22	O00626	93 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MUSK	O15146	869 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	KATNA1	O75449	491 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TIPRL	O75663	272 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RASAL1	O95294	804 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SIX3	O95343	332 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	OTC	P00480	354 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LDLR	P01130	860 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ASL	P04424	464 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SELP	P16109	830 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ZNF7	P17097	686 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CHRM3	P20309	590 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CAPN3	P20807	821 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RPS3	P23396	243 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MC4R	P32245	332 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PIK3CG	P48736	1102 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	FOXK2	Q01167	660 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PLOD1	Q02809	727 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GRB7	Q14451	532 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SEMA3A	Q14563	771 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	IHH	Q14623	411 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CYTH1	Q15438	398 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TSN	Q15631	228 aa	Known RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ATP6AP1	Q15904	470 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LRRC23	Q53EV4	343 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ZRANB3	Q5FWF4	1079 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	NHSL2	Q5HYW2	709 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ADGRF1	Q5T601	910 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RETREG3	Q86VR2	466 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	HID1	Q8IV36	788 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CROCCP3	Q8IVE0	287 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GLB1L3	Q8NCI6	653 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	OR9I1	Q8NGQ6	314 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GIPC2	Q8TF65	315 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LINGO1	Q96FE5	620 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ZNF512	Q96ME7	567 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	BIRC8	Q96P09	236 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CIB1	Q99828	191 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LRRC3	Q9BY71	257 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RBM38	Q9H0Z9	239 aa	Known RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CAAP1	Q9H8G2	361 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MAGEE1	Q9HCI5	957 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CMTM6	Q9NX76	183 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PKD2L2	Q9NZM6	624 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	FAM50B	Q9Y247	325 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SLC27A5	Q9Y2P5	690 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	DHRS7	Q9Y394	339 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	BACE2	Q9Y5Z0	518 aa		13.88	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ANKRD33B	A6NCL7	494 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516		F8W810	466 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516		H0YAE9	185 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SLC28A1	O00337	649 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	PRMT5	O14744	637 aa	Predicted RBP	13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ARPC2	O15144	300 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SYNCRIP	O60506	623 aa	Known RBP	13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	WDR47	O94967	919 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CSPG5	O95196	566 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TSPAN8	P19075	237 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ATP6V1B2	P21281	511 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GSK3B	P49841	420 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	AP1S1	P61966	158 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LIPE	Q05469	1076 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MERTK	Q12866	999 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TAF12	Q16514	161 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	FXN	Q16595	210 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CYP51A1	Q16850	503 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MYLK3	Q32MK0	819 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CDKL4	Q5MAI5	379 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ABRAXAS1	Q6UWZ7	409 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RPS27L	Q71UM5	84 aa	Known RBP	13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ARHGAP22	Q7Z5H3	698 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	GPR141	Q7Z602	305 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	AMIGO2	Q86SJ2	522 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CIR1	Q86X95	450 aa	Predicted RBP	13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	SPPL2C	Q8IUH8	684 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	DHRSX	Q8N5I4	330 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	LPCAT1	Q8NF37	534 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	OR7D4	Q8NG98	312 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ZFP28	Q8NHY6	868 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ADAMTS16	Q8TE57	1224 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	RDH12	Q96NR8	316 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	ZBED2	Q9BTP6	218 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	OSBPL6	Q9BZF3	934 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	MUC3B	Q9H195	1237 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	TUBB1	Q9H4B7	451 aa		13.87	□□□□□ -0.19
NEDD4L-223	ENST00000588516	CCSER2	Q9H7U1	834 aa		13.87	□□□□□ -0.19

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