RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 TECTAO75443 2155 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 TMEM202A6NGA9 273 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 FPGTO14772 594 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 VEGFDO43915 354 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 PLIN3O60664 434 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 TSPAN12O95859 305 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 LTA4HP09960 611 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 SBK3P0C264 359 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 DHRS4L1P0CG22 281 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 MYCLP1P12525 358 aaPredicted RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 TDGF1P13385 188 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 CD1DP15813 335 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 BCKDHBP21953 392 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 AOAHP28039 575 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 AKT2P31751 481 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 SLC26A3P40879 764 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 MDH1P40925 334 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 SKIV2L2P42285 1042 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 GTF2H3Q13889 308 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 TSNAXIP1Q2TAA8 658 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 BCL7AQ4VC05 210 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 ACSBG2Q5FVE4 666 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 TPRG1LQ5T0D9 272 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 UGT3A1Q6NUS8 523 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 CRTC3Q6UUV7 619 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 KYAT3Q6YP21 454 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 CCDC91Q7Z6B0 441 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 ZNF547Q8IVP9 402 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 TMEM151AQ8N4L1 468 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 EEF1AKMT1Q8WVE0 214 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 PTERQ96BW5 349 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 LINGO1Q96FE5 620 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 SCYL1Q96KG9 808 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 TSNARE1Q96NA8 513 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 PAIP2Q9BPZ3 127 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 ZCCHC2Q9C0B9 1178 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 PRMT8Q9NR22 394 aaPredicted RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 PHPT1Q9NRX4 125 aaPredicted RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 SPATS2LQ9NUQ6 558 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 INTS9Q9NV88 658 aaKnown RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 XPR1Q9UBH6 696 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.13□□□□□ -0.63
VMP1-207ENST00000588131 PRKAB1Q9Y478 270 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 SLCO1B1Q9Y6L6 691 aa11.13□□□□□ -0.63
VMP1-207ENST00000588131 WDR91A4D1P6 747 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 TK2O00142 265 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 QSOX1O00391 747 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 CHUKO15111 745 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 ZBTB14O43829 449 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 NUAK1O60285 661 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 NDUFS2O75306 463 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 FTH1P02794 183 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 FUCA1P04066 466 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 TFEBP19484 476 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 PBLDP30039 288 aaPredicted RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 FNTBP49356 437 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 PFN3P60673 137 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 BOP1Q14137 746 aaKnown RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 FAM83EQ2M2I3 478 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 PLA2G4EQ3MJ16 856 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 CCDC153Q494R4 210 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 ZNF658BQ4V348 819 aaPredicted RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 TECRLQ5HYJ1 363 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 AGAP9Q5VTM2 703 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 HHATQ5VTY9 493 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 XKR5Q6UX68 686 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 OTOAQ7RTW8 1153 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 PIWIL4Q7Z3Z4 852 aaKnown RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 LCA5Q86VQ0 697 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 TRAPPC5Q8IUR0 188 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 VRK3Q8IV63 474 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 MAML2Q8IZL2 1156 aaPredicted RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 FSTL5Q8N475 847 aaPredicted RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 NKAPQ8N5F7 415 aaKnown RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 LILRA3Q8N6C8 439 aaPredicted RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 TMEM145Q8NBT3 493 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 SNX19Q92543 992 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 ELMO1Q92556 727 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 TSSK1BQ9BXA7 367 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 DERL2Q9GZP9 239 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 EPHX3Q9H6B9 360 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 NMRAL1Q9HBL8 299 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 CPSF2Q9P2I0 782 aaKnown RBP11.12□□□□□ -0.63
VMP1-207ENST00000588131 GULP1Q9UBP9 304 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 FAM8A1Q9UBU6 413 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 DMTF1Q9Y222 760 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 PIKFYVEQ9Y2I7 2098 aa11.12□□□□□ -0.63
VMP1-207ENST00000588131 A0A1W2PPC4 97 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 NPEPPSL1A6NEC2 478 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 METTL12A8MUP2 240 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 TARM1B6A8C7 271 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 G3V2L1 256 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 PRAMEF26H0Y7S4 382 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 CACNB4O00305 520 aaPredicted RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 CDC7O00311 574 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 MAGEC1O60732 1142 aa11.11□□□□□ -0.63
VMP1-207ENST00000588131 POP7O75817 140 aaKnown RBP11.11□□□□□ -0.63
VMP1-207ENST00000588131 CEACAM5P06731 702 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms