RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CHD8Q9HCK8 2581 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 CACNA1BQ00975 2339 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 IGLV3-16A0A075B6K0 115 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 OTOL1A6NHN0 477 aaPredicted RBP10.26□□□□□ -0.77
LIG3-203ENST00000585370 TRPC5OSA6NMA1 111 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 A8MT66 165 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 PRR5-ARHGAP8B1AHC4 643 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 CHURC1-FNTBB4DL54 471 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 STX16-NPEPL1H3BU86 382 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 MATN2O00339 956 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 STX16O14662 325 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ZBTB14O43829 449 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 LYPLA1O75608 230 aaPredicted RBP10.26□□□□□ -0.77
LIG3-203ENST00000585370 KAT7O95251 611 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 CTSLP07711 333 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 SERPINA6P08185 405 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 C1SP09871 688 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 OR56A5P0C7T3 313 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 KITP10721 976 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 UGT1A6P19224 532 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 UGT1A1P22309 533 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 UGT1A4P22310 534 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 LHCGRP22888 699 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 UGT1A3P35503 534 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 UGT1A5P35504 534 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 FNTBP49356 437 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 CLCN7P51798 805 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 HERVK_113P63132 956 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ARHGAP8P85298 464 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 SPEM2Q0P670 501 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 SRSF5Q13243 272 aaKnown RBP10.26□□□□□ -0.77
LIG3-203ENST00000585370 CCINQ13939 588 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 LRRC32Q14392 662 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ZNF234Q14588 700 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 PON2Q15165 354 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ZNF284Q2VY69 593 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 SETMARQ53H47 684 aaPredicted RBP10.26□□□□□ -0.77
LIG3-203ENST00000585370 ARL13AQ5H913 290 aaPredicted RBP10.26□□□□□ -0.77
LIG3-203ENST00000585370 TTC23LQ6PF05 361 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 NAPRTQ6XQN6 538 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ZNF765Q7L2R6 523 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 CYP2U1Q7Z449 544 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 CLNKQ7Z7G1 428 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 PIM3Q86V86 326 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 SPATA6LQ8N4H0 392 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 PIP4K2CQ8TBX8 421 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 CD200R1Q8TD46 325 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 KCNV2Q8TDN2 545 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 SKA1Q96BD8 255 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ERP27Q96DN0 273 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 DCUN1D1Q96GG9 259 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 RILPQ96NA2 401 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ATOH8Q96SQ7 321 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ERVK-6Q9BXR3 956 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 MYLK2Q9H1R3 596 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ZNF395Q9H8N7 513 aaPredicted RBP10.26□□□□□ -0.77
LIG3-203ENST00000585370 PNPOQ9NVS9 261 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 GMEB2Q9UKD1 530 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 RNF112Q9ULX5 631 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 TRIM33Q9UPN9 1127 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 ATG2BQ96BY7 2078 aa10.26□□□□□ -0.77
LIG3-203ENST00000585370 GOLGA8QA0A0J9YX86 632 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 GOLGA8OA6NCC3 632 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 A8MX80 341 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 GOLGA8NF8WBI6 632 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 KPNA3O00505 521 aaPredicted RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 WNT9AO14904 365 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 KLK8O60259 260 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 RNASEH1O60930 286 aaKnown RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 NIPSNAP2O75323 286 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 UNC5CO95185 931 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 SLC25A14O95258 325 aaPredicted RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 RETP07949 1114 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 ENO3P13929 434 aaPredicted RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 SDHBP21912 280 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 SERPINB3P29508 390 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 ADSLP30566 484 aaPredicted RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 MMP12P39900 470 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 PGGT1BP53609 377 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 KDSRQ06136 332 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 ENPP2Q13822 863 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 SIM2Q14190 667 aaPredicted RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 TMEM52BQ4KMG9 183 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 CDKL4Q5MAI5 379 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 LDLRAP1Q5SW96 308 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 ZNF678Q5SXM1 525 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 SEL1L3Q68CR1 1132 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 LAIR1Q6GTX8 287 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 METTL2BQ6P1Q9 378 aaKnown RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 FBXL19Q6PCT2 694 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 EPGNQ6UW88 154 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 LIPIQ6XZB0 460 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 PRR23BQ6ZRT6 265 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 TECPR1Q7Z6L1 1165 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 ADAMTSL2Q86TH1 951 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 LONP2Q86WA8 852 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 GPSM1Q86YR5 675 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 MYO1HQ8N1T3 1032 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 CHCHD4Q8N4Q1 142 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 ZBTB2Q8N680 514 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms