RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MXRA8Q9BRK3 442 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TWSG1Q9GZX9 223 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ABCF3Q9NUQ8 709 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM160Q9NX00 188 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP39A1Q9NYL5 469 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC24A2Q9UI40 661 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PCDHGB5Q9Y5G0 923 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 MAU2Q9Y6X3 613 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 DENND4AQ7Z401 1863 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ATP8B3O60423 1300 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM90A18PA6NE21 464 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM90A16PA6NEW6 464 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM90A9PA6NNJ1 464 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM90A5PA8MXJ8 464 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HAS3O00219 553 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC25A17O43808 307 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 N4BP1O75113 896 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 NKX2-2O95096 273 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 GNA14O95837 355 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM90A15PP0C7V4 464 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM90A14PP0C7W9 464 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ARP10275 920 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 NR2F6P10588 404 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 VPREB1P12018 145 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 LAMP2P13473 410 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PKMP14618 531 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF8P17098 575 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 CD72P21854 359 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 KLRC2P26717 231 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HOXC8P31273 242 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PPP3CCP48454 512 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF75DP51815 510 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HMGCS2P54868 508 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 NAPAP54920 295 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PSMC5P62195 406 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TROAPQ12815 778 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 C15orf59Q2T9L4 293 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TCP11X2Q5H9J9 407 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 C10orf76Q5T2E6 689 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 GKAP1Q5VSY0 366 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 DTX2Q86UW9 622 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 BLIDQ8IZY5 108 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ENDOVQ8N8Q3 282 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 EXOC6Q8TAG9 804 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ASB10Q8WXI3 467 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ATG4AQ8WYN0 398 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 MCRS1Q96EZ8 462 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF419Q96HQ0 510 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 NECTIN4Q96NY8 510 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TASP1Q9H6P5 420 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM206Q9H813 350 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 UBE2ZQ9H832 354 aaPredicted RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 LY9Q9HBG7 655 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PDE7BQ9NP56 450 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PXMP2Q9NR77 195 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HCN3Q9P1Z3 774 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 HAO1Q9UJM8 370 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 STX8Q9UNK0 236 aa1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 PTRH2Q9Y3E5 179 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 ASH1LQ9NR48 2969 aaKnown RBP1.94□□□□□ -2.1
SMCHD1-211ENST00000584897 A1L4Q6 167 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 C17orf102A2RUQ5 167 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 H7C1Q1 480 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KRT86O43790 486 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TACC1O75410 805 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 HLA-DQA2P01906 255 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CXCL10P02778 98 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 QDPRP09417 244 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TMIGD3P0DMS9 266 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 P4HA1P13674 534 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 IL7RP16871 459 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ATF7P17544 494 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CYP3A5P20815 502 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC6A4P31645 630 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PSMB10P40306 273 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC15A1P46059 708 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 BMXP51813 675 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 E2F1Q01094 437 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 POU3F1Q03052 451 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 AIMP2Q13155 320 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 STIM1Q13586 685 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KCNC3Q14003 757 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 KRT81Q14533 505 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 LY6KQ17RY6 165 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ZIK1Q3SY52 487 aaPredicted RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ANXA2RQ3ZCQ2 193 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CEP55Q53EZ4 464 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 CELF3Q5SZQ8 465 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ATG9BQ674R7 924 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TRAPPC11Q7Z392 1133 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 TDRPQ86YL5 185 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 IQUBQ8NA54 791 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 SUN3Q8TAQ9 357 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 URGCPQ8TCY9 931 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 BCAS4Q8TDM0 211 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 PRPF31Q8WWY3 499 aaKnown RBP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 AKAP1Q92667 903 aaKnown RBP eCLIP1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 IFT74Q96LB3 600 aa1.93□□□□□ -2.1
SMCHD1-211ENST00000584897 ADAD1Q96M93 576 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms