RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	SLC22A12	Q96S37	553 aa		4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	RAD21L1	Q9H4I0	556 aa		4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	SYNC	Q9H7C4	482 aa		4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	TBC1D22B	Q9NU19	505 aa		4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	GAGE2D	Q9UEU5	116 aa		4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	FAF1	Q9UNN5	650 aa	Predicted RBP	4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	TCF19	Q9Y242	345 aa		4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.59	□□□□□ -1.67
RHOT1-216	ENST00000584692	PRR23A	A6NEV1	266 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	FAM72C	H0Y354	149 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	TMEM189-UBE2V1	I3L0A0	370 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	ZBTB43	O43298	467 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	MITF	O75030	526 aa	Predicted RBP	4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	TFAP2A	P05549	437 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	HOXD13	P35453	343 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	DCT	P40126	519 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	GLIPR1	P48060	266 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	DRG2	P55039	364 aa	Known RBP	4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	UBE2V1	Q13404	147 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	MAPRE1	Q15691	268 aa	Known RBP	4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	DUSP28	Q4G0W2	176 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	HYI	Q5T013	277 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	FAM72A	Q5TYM5	149 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	FAM72D	Q6L9T8	149 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	PACS1	Q6VY07	963 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	FAM72B	Q86X60	149 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	GALNT13	Q8IUC8	556 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	SMPDL3B	Q92485	455 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	LRRC59	Q96AG4	307 aa	Known RBP	4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	C17orf77	Q96MU5	243 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	TIGD1	Q96MW7	591 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	SLX1A	Q9BQ83	275 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	KRTAP4-3	Q9BYR4	195 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	SMARCAD1	Q9H4L7	1026 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	TRPC7	Q9HCX4	862 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	DNAJB4	Q9UDY4	337 aa		4.58	□□□□□ -1.68
RHOT1-216	ENST00000584692	ZNF644	Q9H582	1327 aa	Predicted RBP	4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	FSD2	A1L4K1	749 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692		H0YIN7	160 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	BMP10	O95393	424 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	TCEA1	P23193	301 aa	Known RBP	4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	CDKN1A	P38936	164 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	NR2C2	P49116	596 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	NAP1L1	P55209	391 aa	Known RBP	4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	LINC01547	P58512	204 aa	Predicted RBP	4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	CD81	P60033	236 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	RAB41	Q5JT25	222 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	PLEKHS1	Q5SXH7	462 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	PLA2G4F	Q68DD2	849 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	GALNT5	Q7Z7M9	940 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	LONP2	Q86WA8	852 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	FAM120B	Q96EK7	910 aa	Known RBP	4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	GHITM	Q9H3K2	345 aa		4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692	TFB2M	Q9H5Q4	396 aa	Known RBP	4.57	□□□□□ -1.68
RHOT1-216	ENST00000584692		A6NCN8	305 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	PLK4	O00444	970 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	NDUFS4	O43181	175 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	PRLR	P16471	622 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	MMP15	P51511	669 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	CREB5	Q02930	508 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	MBTD1	Q05BQ5	628 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	KCNC3	Q14003	757 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	RBM39	Q14498	530 aa	Known RBP	4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	FAM205BP	Q63HN1	556 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	C1orf131	Q8NDD1	294 aa	Known RBP	4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	DDO	Q99489	341 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	HGH1	Q9BTY7	390 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	SEMA6A	Q9H2E6	1030 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	HRH4	Q9H3N8	390 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	DNAJC18	Q9H819	358 aa		4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	UPF2	Q9HAU5	1272 aa	Known RBP	4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	MAP3K20	Q9NYL2	800 aa	Known RBP	4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	SEC63	Q9UGP8	760 aa	Known RBP	4.56	□□□□□ -1.68
RHOT1-216	ENST00000584692	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	PAPSS1	O43252	624 aa	Predicted RBP	4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	GCNT3	O95395	438 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	LIPF	P07098	398 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	PRSS1	P07477	247 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	SUOX	P51687	545 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	MFAP4	P55083	255 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	MC1R	Q01726	317 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	DUOXA1	Q1HG43	343 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	SLC27A1	Q6PCB7	646 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	GSG1L	Q6UXU4	331 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	SZRD1	Q7Z422	152 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	PTOV1	Q86YD1	416 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	NSUN4	Q96CB9	384 aa	Known RBP	4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	CEP295NL	Q96MC4	621 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	BARD1	Q99728	777 aa	Known RBP	4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	UBA5	Q9GZZ9	404 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	AMACR	Q9UHK6	382 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	ACAD8	Q9UKU7	415 aa		4.55	□□□□□ -1.68
RHOT1-216	ENST00000584692	LRRC72	A6NJI9	287 aa		4.54	□□□□□ -1.68
RHOT1-216	ENST00000584692	RSL1D1	O76021	490 aa	Known RBP	4.54	□□□□□ -1.68
RHOT1-216	ENST00000584692	LDLR	P01130	860 aa		4.54	□□□□□ -1.68
RHOT1-216	ENST00000584692	CFC1B	P0CG36	223 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms