RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PDE1BQ01064 536 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 DMPKQ09013 629 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 PCSK4Q6UW60 755 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 CCDC112Q8NEF3 446 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 LRRC45Q96CN5 670 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 SGF29Q96ES7 293 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 FAM96AQ9H5X1 160 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 SLC40A1Q9NP59 571 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 SLC39A1Q9NY26 324 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 FEZ2Q9UHY8 353 aaPredicted RBP21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 PCDHGA3Q9Y5H0 932 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 B3GALT1Q9Y5Z6 326 aa21.06■□□□□ 0.96
PPP4R1-228ENST00000584074 EIF4E1BA6NMX2 242 aaKnown RBP21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 B4E171 279 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 ARHGAP6O43182 974 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 UBXN7O94888 489 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 TPH1P17752 444 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 CD82P27701 267 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 TSPAN7P41732 249 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 HALP42357 657 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 GFERP55789 205 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 GPR18Q14330 331 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 NFE2L1Q14494 772 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 LONRF2Q1L5Z9 754 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 MICALCLQ6ZW33 695 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 VASH2Q86V25 355 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 DTX1Q86Y01 620 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 BMPERQ8N8U9 685 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 JPH3Q8WXH2 748 aaPredicted RBP21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 SLC39A7Q92504 469 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 CXorf40BQ96DE9 158 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 LRRC40Q9H9A6 602 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 POT1Q9NUX5 634 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 PSMD13Q9UNM6 376 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 PCDHB11Q9Y5F2 797 aa21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 DNMT3AQ9Y6K1 912 aaPredicted RBP21.05■□□□□ 0.96
PPP4R1-228ENST00000584074 PRB1P04280 392 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 P3H1Q32P28 736 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 SEL1L2Q5TEA6 688 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 KIAA1614Q5VZ46 1190 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 ANKS6Q68DC2 871 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 PLXDC1Q8IUK5 500 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 ZNF514Q96K75 400 aaPredicted RBP21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 DNAJC1Q96KC8 554 aaKnown RBP21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 DDA1Q9BW61 102 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 PIH1D1Q9NWS0 290 aaKnown RBP21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 CRLS1Q9UJA2 301 aa21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 MN1Q10571 1320 aaPredicted RBP21.04■□□□□ 0.96
PPP4R1-228ENST00000584074 AGAP14A8MT82 685 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 SGTAO43765 313 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 LIASO43766 372 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 AP2A1O95782 977 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 AMD1P17707 334 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 HADHAP40939 763 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 RHDQ02161 417 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 COL9A2Q14055 689 aaPredicted RBP21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 OASLQ15646 514 aaKnown RBP21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 RPE65Q16518 533 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 MANEAQ5SRI9 462 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 DCAF12Q5T6F0 453 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 METRNLQ641Q3 311 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 SLC13A5Q86YT5 568 aaPredicted RBP21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 NXPE1Q8N323 547 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 RTP4Q96DX8 246 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 TGM7Q96PF1 710 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 CTRCQ99895 268 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 ASPSCR1Q9BZE9 553 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 FAM8A1Q9UBU6 413 aa21.03■□□□□ 0.96
PPP4R1-228ENST00000584074 STMND1H3BQB6 276 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 ERVH48-1M5A8F1 160 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 C9P02748 559 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 ITGALP20701 1170 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 MC4RP32245 332 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 MC2RQ01718 297 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 POU6F1Q14863 301 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 RPS6KA1Q15418 735 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 MEI1Q5TIA1 1274 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 RBM12BQ8IXT5 1001 aaKnown RBP21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 LSM14AQ8ND56 463 aaKnown RBP21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 GPR150Q8NGU9 434 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 C1orf54Q8WWF1 131 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 RSC1A1Q92681 617 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 ULK4Q96C45 1275 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 DCUN1D1Q96GG9 259 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 C9orf72Q96LT7 481 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 C19orf43Q9BQ61 176 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 LZTFL1Q9NQ48 299 aa21.02■□□□□ 0.96
PPP4R1-228ENST00000584074 ATRXP46100 2492 aa21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 MGAT4DA6NG13 374 aa21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 TK2O00142 265 aa21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 CAPN5O15484 640 aaPredicted RBP21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 STIP1P31948 543 aaKnown RBP21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 LEPRP48357 1165 aaKnown RBP21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 CDKN1CP49918 316 aaPredicted RBP21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 RAB15P59190 212 aa21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 SEPT6Q14141 434 aa21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 BCL7AQ4VC05 210 aa21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 TAF1BQ53T94 588 aaPredicted RBP21.01■□□□□ 0.95
PPP4R1-228ENST00000584074 XKR5Q6UX68 686 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms