RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LSM14AQ8ND56 463 aaKnown RBP9.72□□□□□ -0.85
SKA2-208ENST00000583927 AGBL5Q8NDL9 886 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 OR13C4Q8NGS5 318 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 OR2L2Q8NH16 312 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 SGSM3Q96HU1 749 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 CCDC74BQ96LY2 380 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 APOL2Q9BQE5 337 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 OSGEPL1Q9H4B0 414 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 SLC40A1Q9NP59 571 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 LZTFL1Q9NQ48 299 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 HOMER3Q9NSC5 361 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 SCHIP1Q9P0W5 487 aaPredicted RBP9.72□□□□□ -0.85
SKA2-208ENST00000583927 PAK5Q9P286 719 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 ZNF624Q9P2J8 865 aaPredicted RBP9.72□□□□□ -0.85
SKA2-208ENST00000583927 EPHA6Q9UF33 1036 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 FKBPLQ9UIM3 349 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 ACSL5Q9ULC5 683 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 ZNF148Q9UQR1 794 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 PPP2R2CQ9Y2T4 447 aa9.72□□□□□ -0.85
SKA2-208ENST00000583927 SPTBP11277 2137 aa9.71□□□□□ -0.85
SKA2-208ENST00000583927 ATRXP46100 2492 aa9.71□□□□□ -0.85
SKA2-208ENST00000583927 TRBV23OR9-2A0A075B6M9 112 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 TEX51A0A1B0GUA7 166 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 MGAT4DA6NG13 374 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 PDZK1P1A8MUH7 402 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 C9orf172C9J069 976 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 GPR39O43194 453 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 SGTAO43765 313 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 VIPP01282 170 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 LIPCP11150 499 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 ATP1B2P14415 290 aaPredicted RBP9.71□□□□□ -0.86
SKA2-208ENST00000583927 CSTF2P33240 577 aaKnown RBP eCLIP9.71□□□□□ -0.86
SKA2-208ENST00000583927 ETV5P41161 510 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 HALP42357 657 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 PRLHRP49683 370 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 RAB15P59190 212 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 CLN3Q13286 438 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 SPARCL1Q14515 664 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 SKIDA1Q1XH10 827 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 TMEM164Q5U3C3 297 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 NKAIN2Q5VXU1 208 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 ARMC3Q5W041 872 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 TMEM220Q6QAJ8 160 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 DTX1Q86Y01 620 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 PLXDC1Q8IUK5 500 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 BMPERQ8N8U9 685 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 ATG4AQ8WYN0 398 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 CDKN2AIPNLQ96HQ2 116 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 TAAR9Q96RI9 348 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 RANBP9Q96S59 729 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 COPS8Q99627 209 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 DDA1Q9BW61 102 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 ASPSCR1Q9BZE9 553 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 ETNK1Q9HBU6 452 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 ZDHHC3Q9NYG2 299 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 SEMA5BQ9P283 1151 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 PISDQ9UG56 409 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 CRLS1Q9UJA2 301 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 DNAJC16Q9Y2G8 782 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 KCTD3Q9Y597 815 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 SLC30A1Q9Y6M5 507 aa9.71□□□□□ -0.86
SKA2-208ENST00000583927 FASNP49327 2511 aaKnown RBP9.7□□□□□ -0.86
SKA2-208ENST00000583927 OR2AG2A6NM03 316 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 CFAP99D6REC4 459 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 TK2O00142 265 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 AP3B1O00203 1094 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 QSOX1O00391 747 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 KLK10O43240 276 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 UBXN7O94888 489 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 FGF3P11487 239 aaPredicted RBP9.7□□□□□ -0.86
SKA2-208ENST00000583927 HGFP14210 728 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 ITIH1P19827 911 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 ACRV1P26436 265 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 RPL10P27635 214 aaKnown RBP9.7□□□□□ -0.86
SKA2-208ENST00000583927 AKT1P31749 480 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 MC4RP32245 332 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 CDK16Q00536 496 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 ACVR1Q04771 509 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 CACNG1Q06432 222 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 ITIH4Q14624 930 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 CLCA4Q14CN2 919 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 PLA2G4EQ3MJ16 856 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 ZNF658BQ4V348 819 aaPredicted RBP9.7□□□□□ -0.86
SKA2-208ENST00000583927 FOXR1Q6PIV2 292 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 XKR5Q6UX68 686 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 NLRP9Q7RTR0 991 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 GPR155Q7Z3F1 870 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 TRIM48Q8IWZ4 208 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 RCBTB1Q8NDN9 531 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 HM13Q8TCT9 377 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 C1orf54Q8WWF1 131 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 NCSTNQ92542 709 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 CXorf40BQ96DE9 158 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 SGF29Q96ES7 293 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 WBP1Q96G27 269 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 DNAJC1Q96KC8 554 aaKnown RBP9.7□□□□□ -0.86
SKA2-208ENST00000583927 TEFMQ96QE5 360 aaKnown RBP9.7□□□□□ -0.86
SKA2-208ENST00000583927 UBL7Q96S82 380 aaPredicted RBP9.7□□□□□ -0.86
SKA2-208ENST00000583927 ZPBPQ9BS86 351 aa9.7□□□□□ -0.86
SKA2-208ENST00000583927 CCM2Q9BSQ5 444 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms