RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SYBUQ9NX95 663 aa13.34□□□□□ -0.27
CSNK1D-220ENST00000581737 CTNNAL1Q9UBT7 734 aa13.34□□□□□ -0.27
CSNK1D-220ENST00000581737 PCOLCE2Q9UKZ9 415 aa13.34□□□□□ -0.27
CSNK1D-220ENST00000581737 SLC30A1Q9Y6M5 507 aa13.34□□□□□ -0.27
CSNK1D-220ENST00000581737 PLXNB3Q9ULL4 1909 aa13.34□□□□□ -0.27
CSNK1D-220ENST00000581737 GMNCA6NCL1 334 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 H3BM21 787 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 H7C0S8 307 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 TNFRSF10CO14798 259 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 PRAMEF1O95521 474 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 SOD1P00441 154 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 ZNF883P0CG24 379 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 PSMA3P25788 255 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 CCT8P50990 548 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 SLC14A1Q13336 389 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 FZD2Q14332 565 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 HLA-BQ31612 363 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 TSTD2Q5T7W7 516 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 HHATQ5VTY9 493 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 IGDCC3Q8IVU1 814 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 ANKRD42Q8N9B4 389 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 OR56A4Q8NGH8 313 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 BCAS4Q8TDM0 211 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 ACMSDQ8TDX5 336 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 BTN2A2Q8WVV5 523 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 GLYATL1Q969I3 302 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 ULK4Q96C45 1275 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 CHMP6Q96FZ7 201 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 CABS1Q96KC9 395 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 CPNE1Q99829 537 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 WDR83Q9BRX9 315 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 KIFC1Q9BW19 673 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 ZCCHC2Q9C0B9 1178 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 GAREM1Q9H706 876 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 SMOXQ9NWM0 555 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 MOCS1Q9NZB8 636 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 KLQ9UEF7 1012 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 FKBPLQ9UIM3 349 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 KCTD3Q9Y597 815 aa13.33□□□□□ -0.28
CSNK1D-220ENST00000581737 FADS2P1A8MWK0 482 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 GPR89AB7ZAQ6 455 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 INPP4BO15327 924 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 FAM155BO75949 473 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 SRP72O76094 671 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 RASGRP1O95267 797 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 FAM107AO95990 144 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 GPR89BP0CG08 455 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 NME1P15531 152 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 GCAP28676 217 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 SPRP35270 261 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 GP5P40197 560 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 RXRGP48443 463 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 CSE1LP55060 971 aaKnown RBP13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.286e-9■□□□□ 9.6
CSNK1D-220ENST00000581737 PRAMEP78395 509 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 TMPRSS15P98073 1019 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 PPARDQ03181 441 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 ACVR1Q04771 509 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 CHRNA6Q15825 494 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 INAVAQ3KP66 663 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 GPR33Q49SQ1 333 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 ATP13A5Q4VNC0 1218 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 LDLRAP1Q5SW96 308 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 GRTP1Q5TC63 336 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 AFTPHQ6ULP2 937 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 ENPP7Q6UWV6 458 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 SNX20Q7Z614 316 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 CPLX4Q7Z7G2 160 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 GLRX5Q86SX6 157 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 TMEM135Q86UB9 458 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 TRIM42Q8IWZ5 723 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 LMNTD2Q8IXW0 634 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 PELI3Q8N2H9 469 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 BAHD1Q8TBE0 780 aaPredicted RBP13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 ZNF398Q8TD17 642 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 CALML6Q8TD86 181 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 COX14Q96I36 57 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 APOPT1Q96IL0 206 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 TBATAQ96M53 351 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 AGAP2Q99490 1192 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 FAM167BQ9BTA0 163 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 FAM107BQ9H098 131 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 DNAJC28Q9NX36 388 aa13.32□□□□□ -0.28
CSNK1D-220ENST00000581737 LRP4O75096 1905 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 A0A1B0GTQ1 180 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 FAM149AA5PLN7 773 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 COPEO14579 308 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 DKK1O94907 266 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 SLC25A14O95258 325 aaPredicted RBP13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 ASMTLO95671 621 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 CSF2P04141 144 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 KRT4P19013 534 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 MC4RP32245 332 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 SRP54P61011 504 aaKnown RBP13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 CRADDP78560 199 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 CACNG1Q06432 222 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 CYP4F3Q08477 520 aa13.31□□□□□ -0.28
CSNK1D-220ENST00000581737 NFATC2Q13469 925 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms