RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 GPATCH11Q8N954 259 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 ASZ1Q8WWH4 475 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 OR1E3Q8WZA6 343 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 KCNJ9Q92806 393 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 MRRFQ96E11 262 aaKnown RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 BIRC8Q96P09 236 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 RUFY1Q96T51 708 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 PAFAH2Q99487 392 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 ELF4Q99607 663 aaPredicted RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 AARSD1Q9BTE6 412 aaKnown RBP14.07□□□□□ -0.16
SKA2-205ENST00000580541 GSDMCQ9BYG8 508 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 FGF22Q9HCT0 170 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 SMYD2Q9NRG4 433 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 ACSL5Q9ULC5 683 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 DOLKQ9UPQ8 538 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 SNX11Q9Y5W9 270 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 SLCO1B1Q9Y6L6 691 aa14.07□□□□□ -0.16
SKA2-205ENST00000580541 PROB1E7EW31 1015 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 RASGRF2O14827 1237 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 LIN7AO14910 233 aaPredicted RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 CDH16O75309 829 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 C1QAP02745 245 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 SNRPAP09012 282 aaKnown RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 H2AFXP16104 143 aaPredicted RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 GABRB3P28472 473 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 CA5AP35218 305 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 CLCNKAP51800 687 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 LIMK2P53671 638 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 ARHGAP8P85298 464 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 RPA4Q13156 261 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 SUZ12Q15022 739 aaKnown RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 ZNF423Q2M1K9 1284 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 LVRNQ6Q4G3 990 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 ADGRD1Q6QNK2 874 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 CRTC3Q6UUV7 619 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 CHST15Q7LFX5 561 aaPredicted RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 GKN2Q86XP6 184 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 TDRPQ86YL5 185 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 OR2L2Q8NH16 312 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 ELMO2Q96JJ3 720 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 EPB41L4BQ9H329 900 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 SYTL2Q9HCH5 934 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 MRPL40Q9NQ50 206 aaKnown RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 LATS2Q9NRM7 1088 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 PSMC3IPQ9P2W1 217 aaPredicted RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 APOBEC3BQ9UH17 382 aaKnown RBP14.06□□□□□ -0.16
SKA2-205ENST00000580541 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 PSAT1Q9Y617 370 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 CSNK1G3Q9Y6M4 447 aa14.06□□□□□ -0.16
SKA2-205ENST00000580541 FAM95CA0A1B0GW59 222 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 GOLGA6L10A6NI86 522 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 ITGA2BP08514 1039 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 SLC2A4P14672 509 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 STMN1P16949 149 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 IDSP22304 550 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 CRABP2P29373 138 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 RGS4P49798 205 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 CTSCP53634 463 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 IRX4P78413 519 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 DMPKQ09013 629 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 GRIK2Q13002 908 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 PDAP1Q13442 181 aaKnown RBP14.05□□□□□ -0.16
SKA2-205ENST00000580541 USP10Q14694 798 aaKnown RBP14.05□□□□□ -0.16
SKA2-205ENST00000580541 HLA-BQ31612 363 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 SYTL3Q4VX76 610 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 PRRT3Q5FWE3 981 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 PLEKHS1Q5SXH7 462 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 HECTD2Q5U5R9 776 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 LRRC8EQ6NSJ5 796 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 LAYNQ6UX15 382 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 LRIG3Q6UXM1 1119 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 KDM7AQ6ZMT4 941 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 CFAP206Q8IYR0 622 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 HM13Q8TCT9 377 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 ELMO1Q92556 727 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 INPP5DQ92835 1189 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 TMEM159Q96B96 161 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 PDXPQ96GD0 296 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 GPR22Q99680 433 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 TMEM109Q9BVC6 243 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 GAREM1Q9H706 876 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 POPDC3Q9HBV1 291 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 TRMT6Q9UJA5 497 aaKnown RBP14.05□□□□□ -0.16
SKA2-205ENST00000580541 PRSS21Q9Y6M0 314 aa14.05□□□□□ -0.16
SKA2-205ENST00000580541 TDRD6O60522 2096 aaKnown RBP14.05□□□□□ -0.16
SKA2-205ENST00000580541 TLDC2A0PJX2 215 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 EIF3FO00303 357 aaPredicted RBP14.04□□□□□ -0.16
SKA2-205ENST00000580541 PIAS1O75925 651 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 CBSLP0DN79 551 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 ACP5P13686 325 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 DGKAP23743 735 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 ATP5DP30049 168 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 CBSP35520 551 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 MAPK9P45984 424 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 CASP8Q14790 479 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 CSRP2Q16527 193 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 ZNF542PQ5EBM4 170 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 ZNF789Q5FWF6 425 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 CTSL3PQ5NE16 218 aa14.04□□□□□ -0.16
SKA2-205ENST00000580541 TPRG1LQ5T0D9 272 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms