RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 RWDD2BP57060 319 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 GSTM4Q03013 218 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 SRSF6Q13247 344 aaKnown RBP14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 MSLNQ13421 630 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 BCL7AQ4VC05 210 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 GPRC6AQ5T6X5 926 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 CRTC3Q6UUV7 619 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 CCDC50Q8IVM0 306 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 CDKL3Q8IVW4 592 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 TTC13Q8NBP0 860 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 ZNF398Q8TD17 642 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 KRT35Q92764 455 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 CXorf40BQ96DE9 158 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 SLC41A2Q96JW4 573 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 OSBPL8Q9BZF1 889 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 ZMYND15Q9H091 742 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 SLC25A18Q9H1K4 315 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 SLC30A1Q9Y6M5 507 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 PTPN13Q12923 2485 aa14.22□□□□□ -0.13
SMARCE1-216ENST00000580419 FLNCQ14315 2725 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 C17orf113A0A1B0GUU1 675 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 MGAT4DA6NG13 374 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 H7C0S8 307 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 STX7O15400 261 aaKnown RBP14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 POP7O75817 140 aaKnown RBP14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 CRTAMO95727 393 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 MT-ND3P03897 115 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 TNNT1P13805 278 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 NELFEP18615 380 aaKnown RBP14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 PSMA3P25788 255 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 NDUFS1P28331 727 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 RBL1P28749 1068 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 STAT5AP42229 794 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 CHRNA4P43681 627 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 MARCKSL1P49006 195 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 GPR18Q14330 331 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 PRPSAP1Q14558 356 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 CLCA4Q14CN2 919 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 CHRNA6Q15825 494 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 GPR33Q49SQ1 333 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 ZNF648Q5T619 568 aaPredicted RBP14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 RASGEF1AQ8N9B8 481 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 LRRC57Q8N9N7 239 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 IPMKQ8NFU5 416 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 OR2L2Q8NH16 312 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 OR8K5Q8NH50 307 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 GDAP1Q8TB36 358 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 ACTL9Q8TC94 416 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 BLOC1S5Q8TDH9 187 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 SPATA13Q96N96 652 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 GPN2Q9H9Y4 310 aaPredicted RBP14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 BPIFA1Q9NP55 256 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 ARFGAP3Q9NP61 516 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 PCDHGA6Q9Y5G7 932 aa14.21□□□□□ -0.13
SMARCE1-216ENST00000580419 MIF4GDA9UHW6 222 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 H7C0C1 242 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 SUV39H1O43463 412 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 MTX2O75431 263 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 MSL3P1P0C860 447 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 RBP3P10745 1247 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 RPL10P27635 214 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 ATP5OP48047 213 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 OTUD4Q01804 1114 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 RPE65Q16518 533 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 ANKRD20A2Q5SQ80 823 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 ANKRD20A1Q5TYW2 823 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 ANKRD20A3Q5VUR7 823 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 FAM151BQ6UXP7 276 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 TIPARPQ7Z3E1 657 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 SEC14L1Q92503 715 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 ULK4Q96C45 1275 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 GORASP1Q9BQQ3 440 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 CCM2Q9BSQ5 444 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 GOLPH3Q9H4A6 298 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 DNAJC16Q9Y2G8 782 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 HEBP2Q9Y5Z4 205 aa14.2□□□□□ -0.14
SMARCE1-216ENST00000580419 IGLV3-16A0A075B6K0 115 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 OR52A4PA6NMU1 304 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 A8MU76 341 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 MATN2O00339 956 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 TERTO14746 1132 aaKnown RBP14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 SRP72O76094 671 aaKnown RBP14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 PRAMEF1O95521 474 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 SLC4A1P02730 911 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 RALBP11234 206 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 MTHFD1P11586 935 aaKnown RBP14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 CCR10P46092 362 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 CSRP3P50461 194 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 ZNF75DP51815 510 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 VAV2P52735 878 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 CTSCP53634 463 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 GFERP55789 205 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 XIAPP98170 497 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 SNAP47Q5SQN1 464 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 TMEM220Q6QAJ8 160 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 ATG14Q6ZNE5 492 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 B4GALNT4Q76KP1 1039 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 SYCE1Q8N0S2 351 aa14.19□□□□□ -0.14
SMARCE1-216ENST00000580419 SLC25A41Q8N5S1 370 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms